Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC25A1P53007 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC25A1P53007 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC25A1P53007 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SLC25A1P53007 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC25A1P53007 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC25A1P53007 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC25A1P53007 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC25A1P53007 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC25A1P53007 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A1P53007 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A1P53007 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC25A1P53007 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A1P53007 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A1P53007 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A1P53007 IRS3P-201ENST00000223076 1006 ntBASIC18.32■□□□□ 0.52
SLC25A1P53007 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A1P53007 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC25A1P53007 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC25A1P53007 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A1P53007 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC25A1P53007 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A1P53007 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A1P53007 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC25A1P53007 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A1P53007 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC25A1P53007 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC25A1P53007 AL512408.1-201ENST00000569378 2000 ntBASIC18.32■□□□□ 0.52
SLC25A1P53007 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC25A1P53007 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC25A1P53007 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.31■□□□□ 0.52
SLC25A1P53007 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC25A1P53007 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC25A1P53007 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC25A1P53007 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC25A1P53007 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC25A1P53007 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC25A1P53007 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC25A1P53007 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC25A1P53007 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A1P53007 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC25A1P53007 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC25A1P53007 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC25A1P53007 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC25A1P53007 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A1P53007 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC25A1P53007 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A1P53007 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A1P53007 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC25A1P53007 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC25A1P53007 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.3■□□□□ 0.52
SLC25A1P53007 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A1P53007 AC092720.2-201ENST00000602388 1665 ntBASIC18.3■□□□□ 0.52
SLC25A1P53007 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A1P53007 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A1P53007 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A1P53007 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A1P53007 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC25A1P53007 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC25A1P53007 LINC02228-203ENST00000641970 1355 ntBASIC18.3■□□□□ 0.52
SLC25A1P53007 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SLC25A1P53007 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SLC25A1P53007 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC25A1P53007 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A1P53007 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A1P53007 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A1P53007 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SLC25A1P53007 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC25A1P53007 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A1P53007 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC25A1P53007 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SLC25A1P53007 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC25A1P53007 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
SLC25A1P53007 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC25A1P53007 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SLC25A1P53007 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A1P53007 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC25A1P53007 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A1P53007 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SLC25A1P53007 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A1P53007 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC25A1P53007 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC25A1P53007 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A1P53007 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A1P53007 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms