Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGA2P52926 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.85■□□□□ 0.61
HMGA2P52926 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGA2P52926 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HMGA2P52926 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGA2P52926 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGA2P52926 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.85■□□□□ 0.61
HMGA2P52926 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGA2P52926 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.84■□□□□ 0.61
HMGA2P52926 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGA2P52926 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HMGA2P52926 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGA2P52926 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGA2P52926 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HMGA2P52926 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGA2P52926 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.84■□□□□ 0.61
HMGA2P52926 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGA2P52926 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.84■□□□□ 0.61
HMGA2P52926 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.84■□□□□ 0.61
HMGA2P52926 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HMGA2P52926 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGA2P52926 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGA2P52926 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGA2P52926 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HMGA2P52926 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGA2P52926 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGA2P52926 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
HMGA2P52926 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGA2P52926 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
HMGA2P52926 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HMGA2P52926 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGA2P52926 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.83■□□□□ 0.6
HMGA2P52926 POU5F1P4-201ENST00000413175 1085 ntBASIC18.83■□□□□ 0.6
HMGA2P52926 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
HMGA2P52926 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.83■□□□□ 0.6
HMGA2P52926 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.83■□□□□ 0.6
HMGA2P52926 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMGA2P52926 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMGA2P52926 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMGA2P52926 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGA2P52926 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGA2P52926 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.83■□□□□ 0.6
HMGA2P52926 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGA2P52926 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGA2P52926 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGA2P52926 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HMGA2P52926 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGA2P52926 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.82■□□□□ 0.6
HMGA2P52926 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.82■□□□□ 0.6
HMGA2P52926 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.82■□□□□ 0.6
HMGA2P52926 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.82■□□□□ 0.6
HMGA2P52926 AC027682.1-201ENST00000562846 899 ntBASIC18.82■□□□□ 0.6
HMGA2P52926 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGA2P52926 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
HMGA2P52926 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGA2P52926 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGA2P52926 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGA2P52926 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.82■□□□□ 0.6
HMGA2P52926 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGA2P52926 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA2P52926 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA2P52926 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.81■□□□□ 0.6
HMGA2P52926 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGA2P52926 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.81■□□□□ 0.6
HMGA2P52926 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA2P52926 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA2P52926 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA2P52926 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGA2P52926 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA2P52926 RARRES2P11-201ENST00000635158 484 ntBASIC18.81■□□□□ 0.6
HMGA2P52926 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGA2P52926 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGA2P52926 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA2P52926 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA2P52926 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA2P52926 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA2P52926 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGA2P52926 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA2P52926 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA2P52926 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA2P52926 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGA2P52926 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA2P52926 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGA2P52926 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGA2P52926 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms