Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.98■■□□□ 1.27
CPT1AP50416 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CPT1AP50416 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.98■■□□□ 1.27
CPT1AP50416 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.98■■□□□ 1.27
CPT1AP50416 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.98■■□□□ 1.27
CPT1AP50416 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CPT1AP50416 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.98■■□□□ 1.27
CPT1AP50416 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.98■■□□□ 1.27
CPT1AP50416 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
CPT1AP50416 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CPT1AP50416 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPT1AP50416 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.97■■□□□ 1.27
CPT1AP50416 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPT1AP50416 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPT1AP50416 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CPT1AP50416 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.97■■□□□ 1.27
CPT1AP50416 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.97■■□□□ 1.27
CPT1AP50416 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.97■■□□□ 1.27
CPT1AP50416 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CPT1AP50416 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.97■■□□□ 1.27
CPT1AP50416 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPT1AP50416 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.97■■□□□ 1.27
CPT1AP50416 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CPT1AP50416 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CPT1AP50416 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPT1AP50416 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CPT1AP50416 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CPT1AP50416 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CPT1AP50416 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CPT1AP50416 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CPT1AP50416 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CPT1AP50416 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.96■■□□□ 1.27
CPT1AP50416 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.96■■□□□ 1.27
CPT1AP50416 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.96■■□□□ 1.27
CPT1AP50416 MIR4497-201ENST00000583208 89 ntBASIC22.96■■□□□ 1.27
CPT1AP50416 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPT1AP50416 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPT1AP50416 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.96■■□□□ 1.27
CPT1AP50416 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPT1AP50416 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
CPT1AP50416 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CPT1AP50416 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPT1AP50416 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CPT1AP50416 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.96■■□□□ 1.27
CPT1AP50416 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPT1AP50416 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
CPT1AP50416 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPT1AP50416 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPT1AP50416 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPT1AP50416 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPT1AP50416 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPT1AP50416 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.95■■□□□ 1.26
CPT1AP50416 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.95■■□□□ 1.26
CPT1AP50416 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPT1AP50416 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CPT1AP50416 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CPT1AP50416 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPT1AP50416 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CPT1AP50416 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
CPT1AP50416 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
CPT1AP50416 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.95■■□□□ 1.26
CPT1AP50416 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.95■■□□□ 1.26
CPT1AP50416 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPT1AP50416 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.94■■□□□ 1.26
CPT1AP50416 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CPT1AP50416 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.94■■□□□ 1.26
CPT1AP50416 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPT1AP50416 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPT1AP50416 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPT1AP50416 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CPT1AP50416 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPT1AP50416 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPT1AP50416 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPT1AP50416 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPT1AP50416 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPT1AP50416 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
CPT1AP50416 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPT1AP50416 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
CPT1AP50416 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CPT1AP50416 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.93■■□□□ 1.26
CPT1AP50416 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPT1AP50416 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPT1AP50416 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CPT1AP50416 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
CPT1AP50416 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.93■■□□□ 1.26
CPT1AP50416 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CPT1AP50416 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.93■■□□□ 1.26
CPT1AP50416 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.93■■□□□ 1.26
CPT1AP50416 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CPT1AP50416 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.93■■□□□ 1.26
CPT1AP50416 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CPT1AP50416 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CPT1AP50416 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPT1AP50416 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.93■■□□□ 1.26
CPT1AP50416 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPT1AP50416 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CPT1AP50416 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.92■■□□□ 1.26
CPT1AP50416 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.92■■□□□ 1.26
CPT1AP50416 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CPT1AP50416 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 2421.5 ms