Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPAP49450 LINC01521-201ENST00000504184 1943 ntBASIC18.61■□□□□ 0.57
CENPAP49450 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPAP49450 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CENPAP49450 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPAP49450 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPAP49450 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.61■□□□□ 0.57
CENPAP49450 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPAP49450 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPAP49450 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPAP49450 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.61■□□□□ 0.57
CENPAP49450 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.61■□□□□ 0.57
CENPAP49450 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPAP49450 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.61■□□□□ 0.57
CENPAP49450 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.61■□□□□ 0.57
CENPAP49450 AL157384.1-201ENST00000445995 2473 ntBASIC18.61■□□□□ 0.57
CENPAP49450 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPAP49450 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.6■□□□□ 0.57
CENPAP49450 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.6■□□□□ 0.57
CENPAP49450 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPAP49450 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CENPAP49450 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.6■□□□□ 0.57
CENPAP49450 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CENPAP49450 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPAP49450 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPAP49450 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPAP49450 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CENPAP49450 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CENPAP49450 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.6■□□□□ 0.57
CENPAP49450 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.6■□□□□ 0.57
CENPAP49450 SUDS3P1-201ENST00000505831 966 ntBASIC18.6■□□□□ 0.57
CENPAP49450 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.6■□□□□ 0.57
CENPAP49450 AC012414.1-201ENST00000556676 535 ntBASIC18.6■□□□□ 0.57
CENPAP49450 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.6■□□□□ 0.57
CENPAP49450 MIR6084-201ENST00000622012 110 ntBASIC18.6■□□□□ 0.57
CENPAP49450 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPAP49450 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPAP49450 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPAP49450 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CENPAP49450 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPAP49450 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CENPAP49450 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPAP49450 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPAP49450 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.6■□□□□ 0.57
CENPAP49450 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.6■□□□□ 0.57
CENPAP49450 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPAP49450 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CENPAP49450 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.6■□□□□ 0.57
CENPAP49450 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CENPAP49450 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.59■□□□□ 0.57
CENPAP49450 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CENPAP49450 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CENPAP49450 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CENPAP49450 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CENPAP49450 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.59■□□□□ 0.57
CENPAP49450 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.59■□□□□ 0.57
CENPAP49450 AL354811.1-201ENST00000610286 706 ntBASIC18.59■□□□□ 0.57
CENPAP49450 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.59■□□□□ 0.57
CENPAP49450 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.59■□□□□ 0.57
CENPAP49450 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.59■□□□□ 0.57
CENPAP49450 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CENPAP49450 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CENPAP49450 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.58■□□□□ 0.57
CENPAP49450 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CENPAP49450 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CENPAP49450 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CENPAP49450 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CENPAP49450 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.58■□□□□ 0.57
CENPAP49450 AC006128.1-201ENST00000624704 1661 ntBASIC18.58■□□□□ 0.57
CENPAP49450 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CENPAP49450 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.58■□□□□ 0.56
CENPAP49450 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.58■□□□□ 0.56
CENPAP49450 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.58■□□□□ 0.56
CENPAP49450 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CENPAP49450 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CENPAP49450 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CENPAP49450 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CENPAP49450 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CENPAP49450 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CENPAP49450 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CENPAP49450 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CENPAP49450 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CENPAP49450 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.58■□□□□ 0.56
CENPAP49450 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CENPAP49450 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CENPAP49450 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.57■□□□□ 0.56
CENPAP49450 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CENPAP49450 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms