Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AC142086.2-201ENST00000569753 217 ntBASIC20.76■□□□□ 0.91
CSNK1DP48730 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.76■□□□□ 0.91
CSNK1DP48730 CYP2T3P-201ENST00000601990 817 ntBASIC20.76■□□□□ 0.91
CSNK1DP48730 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CSNK1DP48730 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.76■□□□□ 0.91
CSNK1DP48730 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1DP48730 AC027702.1-201ENST00000563810 1770 ntBASIC20.76■□□□□ 0.91
CSNK1DP48730 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1DP48730 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1DP48730 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1DP48730 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1DP48730 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1DP48730 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1DP48730 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1DP48730 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.75■□□□□ 0.91
CSNK1DP48730 MIPEPP3-201ENST00000412105 444 ntBASIC20.75■□□□□ 0.91
CSNK1DP48730 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.75■□□□□ 0.91
CSNK1DP48730 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.75■□□□□ 0.91
CSNK1DP48730 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.75■□□□□ 0.91
CSNK1DP48730 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1DP48730 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CSNK1DP48730 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1DP48730 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.75■□□□□ 0.91
CSNK1DP48730 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.75■□□□□ 0.91
CSNK1DP48730 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1DP48730 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1DP48730 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.75■□□□□ 0.91
CSNK1DP48730 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.75■□□□□ 0.91
CSNK1DP48730 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.74■□□□□ 0.91
CSNK1DP48730 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CSNK1DP48730 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CSNK1DP48730 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
CSNK1DP48730 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1DP48730 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1DP48730 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.74■□□□□ 0.91
CSNK1DP48730 AC073210.2-201ENST00000430369 194 ntBASIC20.74■□□□□ 0.91
CSNK1DP48730 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.74■□□□□ 0.91
CSNK1DP48730 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.74■□□□□ 0.91
CSNK1DP48730 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1DP48730 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.74■□□□□ 0.91
CSNK1DP48730 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.74■□□□□ 0.91
CSNK1DP48730 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.74■□□□□ 0.91
CSNK1DP48730 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.74■□□□□ 0.91
CSNK1DP48730 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CSNK1DP48730 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.74■□□□□ 0.91
CSNK1DP48730 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1DP48730 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1DP48730 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.73■□□□□ 0.91
CSNK1DP48730 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CSNK1DP48730 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1DP48730 AC087633.2-202ENST00000565166 1439 ntBASIC20.73■□□□□ 0.91
CSNK1DP48730 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.73■□□□□ 0.91
CSNK1DP48730 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1DP48730 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1DP48730 KRT18P68-201ENST00000392293 1000 ntBASIC20.73■□□□□ 0.91
CSNK1DP48730 PGM5P4-201ENST00000421970 445 ntBASIC20.73■□□□□ 0.91
CSNK1DP48730 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.73■□□□□ 0.91
CSNK1DP48730 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.73■□□□□ 0.91
CSNK1DP48730 AC092118.2-201ENST00000613495 667 ntBASIC20.73■□□□□ 0.91
CSNK1DP48730 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CSNK1DP48730 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1DP48730 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CSNK1DP48730 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1DP48730 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1DP48730 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CSNK1DP48730 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.72■□□□□ 0.91
CSNK1DP48730 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
CSNK1DP48730 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1DP48730 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.72■□□□□ 0.91
CSNK1DP48730 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1DP48730 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1DP48730 BX276092.2-201ENST00000417668 665 ntBASIC20.72■□□□□ 0.91
CSNK1DP48730 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1DP48730 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1DP48730 MIR4758-201ENST00000577688 71 ntBASIC20.72■□□□□ 0.91
CSNK1DP48730 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1DP48730 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1DP48730 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1DP48730 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1DP48730 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.72■□□□□ 0.91
CSNK1DP48730 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1DP48730 PLK5-205ENST00000642079 1969 ntBASIC20.72■□□□□ 0.91
CSNK1DP48730 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1DP48730 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1DP48730 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1DP48730 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1DP48730 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1DP48730 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1DP48730 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1DP48730 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.71■□□□□ 0.91
CSNK1DP48730 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1DP48730 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.71■□□□□ 0.91
CSNK1DP48730 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1DP48730 AL355472.2-201ENST00000422958 438 ntBASIC20.71■□□□□ 0.91
CSNK1DP48730 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.71■□□□□ 0.91
CSNK1DP48730 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.71■□□□□ 0.91
CSNK1DP48730 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.71■□□□□ 0.91
CSNK1DP48730 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1DP48730 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1DP48730 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms