Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RPL13AP40429 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 AC120498.9-201ENST00000339021 3867 ntBASIC14.23□□□□□ -0.13
RPL13AP40429 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.23□□□□□ -0.13
RPL13AP40429 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
RPL13AP40429 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
RPL13AP40429 AC022616.5-201ENST00000518796 181 ntBASIC14.23□□□□□ -0.13
RPL13AP40429 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 AC131274.2-201ENST00000580697 1507 ntBASIC14.23□□□□□ -0.13
RPL13AP40429 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL13AP40429 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL13AP40429 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.23□□□□□ -0.13
RPL13AP40429 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RPL13AP40429 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPL13AP40429 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RPL13AP40429 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
RPL13AP40429 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RPL13AP40429 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RPL13AP40429 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RPL13AP40429 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RPL13AP40429 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RPL13AP40429 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.22□□□□□ -0.13
RPL13AP40429 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RPL13AP40429 RARRES2P1-201ENST00000474487 481 ntBASIC14.22□□□□□ -0.13
RPL13AP40429 SSSCA1-AS1-201ENST00000567594 614 ntBASIC14.22□□□□□ -0.13
RPL13AP40429 AC010980.1-201ENST00000587192 1142 ntBASIC14.22□□□□□ -0.13
RPL13AP40429 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RPL13AP40429 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.22□□□□□ -0.13
RPL13AP40429 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
RPL13AP40429 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL13AP40429 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL13AP40429 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL13AP40429 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.21□□□□□ -0.13
RPL13AP40429 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL13AP40429 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL13AP40429 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL13AP40429 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.21□□□□□ -0.13
RPL13AP40429 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
RPL13AP40429 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.21□□□□□ -0.13
RPL13AP40429 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL13AP40429 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RPL13AP40429 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC14.21□□□□□ -0.13
RPL13AP40429 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.21□□□□□ -0.13
RPL13AP40429 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL13AP40429 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RPL13AP40429 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RPL13AP40429 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RPL13AP40429 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL13AP40429 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.21□□□□□ -0.13
RPL13AP40429 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RPL13AP40429 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.2□□□□□ -0.14
RPL13AP40429 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 MIR4508-201ENST00000584178 70 ntBASIC14.2□□□□□ -0.14
RPL13AP40429 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.2□□□□□ -0.14
RPL13AP40429 AC068587.6-202ENST00000641839 5619 ntBASIC14.2□□□□□ -0.14
RPL13AP40429 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms