Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CKS2P33552 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CKS2P33552 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CKS2P33552 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CKS2P33552 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.16■□□□□ 0.02
CKS2P33552 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CKS2P33552 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.16■□□□□ 0.02
CKS2P33552 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.16■□□□□ 0.02
CKS2P33552 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.16■□□□□ 0.02
CKS2P33552 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CKS2P33552 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CKS2P33552 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CKS2P33552 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.16■□□□□ 0.02
CKS2P33552 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.16■□□□□ 0.02
CKS2P33552 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.16■□□□□ 0.02
CKS2P33552 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CKS2P33552 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CKS2P33552 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CKS2P33552 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CKS2P33552 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CKS2P33552 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CKS2P33552 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.15■□□□□ 0.02
CKS2P33552 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 AC018445.3-201ENST00000624177 1945 ntBASIC15.15■□□□□ 0.02
CKS2P33552 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CKS2P33552 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CKS2P33552 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CKS2P33552 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CKS2P33552 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CKS2P33552 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CKS2P33552 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.15■□□□□ 0.02
CKS2P33552 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CKS2P33552 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CKS2P33552 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CKS2P33552 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CKS2P33552 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.14■□□□□ 0.01
CKS2P33552 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.14■□□□□ 0.01
CKS2P33552 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.14■□□□□ 0.01
CKS2P33552 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.14■□□□□ 0.01
CKS2P33552 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CKS2P33552 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.14■□□□□ 0.01
CKS2P33552 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CKS2P33552 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CKS2P33552 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.14■□□□□ 0.01
CKS2P33552 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKS2P33552 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.13■□□□□ 0.01
CKS2P33552 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CKS2P33552 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CKS2P33552 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CKS2P33552 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.13■□□□□ 0.01
CKS2P33552 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC15.13■□□□□ 0.01
CKS2P33552 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.13■□□□□ 0.01
CKS2P33552 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CKS2P33552 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.13■□□□□ 0.01
CKS2P33552 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms