Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.04■□□□□ 0.8
EPHA3P29320 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA3P29320 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA3P29320 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.04■□□□□ 0.8
EPHA3P29320 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.04■□□□□ 0.8
EPHA3P29320 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA3P29320 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA3P29320 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.04■□□□□ 0.8
EPHA3P29320 AC011484.1-201ENST00000377652 1995 ntBASIC20.04■□□□□ 0.8
EPHA3P29320 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA3P29320 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA3P29320 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
EPHA3P29320 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA3P29320 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA3P29320 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA3P29320 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EPHA3P29320 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
EPHA3P29320 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
EPHA3P29320 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EPHA3P29320 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EPHA3P29320 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EPHA3P29320 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.03■□□□□ 0.8
EPHA3P29320 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.03■□□□□ 0.8
EPHA3P29320 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.03■□□□□ 0.8
EPHA3P29320 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA3P29320 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA3P29320 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.02■□□□□ 0.8
EPHA3P29320 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.02■□□□□ 0.8
EPHA3P29320 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA3P29320 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EPHA3P29320 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
EPHA3P29320 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.02■□□□□ 0.8
EPHA3P29320 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.02■□□□□ 0.8
EPHA3P29320 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EPHA3P29320 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EPHA3P29320 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
EPHA3P29320 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.02■□□□□ 0.79
EPHA3P29320 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.02■□□□□ 0.79
EPHA3P29320 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.01■□□□□ 0.79
EPHA3P29320 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA3P29320 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA3P29320 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA3P29320 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA3P29320 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA3P29320 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.01■□□□□ 0.79
EPHA3P29320 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
EPHA3P29320 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
EPHA3P29320 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA3P29320 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA3P29320 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA3P29320 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.01■□□□□ 0.79
EPHA3P29320 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA3P29320 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHA3P29320 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.01■□□□□ 0.79
EPHA3P29320 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHA3P29320 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
EPHA3P29320 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
EPHA3P29320 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20■□□□□ 0.79
EPHA3P29320 UNC93B3-201ENST00000308076 687 ntBASIC20■□□□□ 0.79
EPHA3P29320 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHA3P29320 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20■□□□□ 0.79
EPHA3P29320 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20■□□□□ 0.79
EPHA3P29320 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20■□□□□ 0.79
EPHA3P29320 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20■□□□□ 0.79
EPHA3P29320 AC105233.4-201ENST00000642045 216 ntBASIC20■□□□□ 0.79
EPHA3P29320 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHA3P29320 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHA3P29320 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20■□□□□ 0.79
EPHA3P29320 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
EPHA3P29320 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20■□□□□ 0.79
EPHA3P29320 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
EPHA3P29320 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.99■□□□□ 0.79
EPHA3P29320 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
EPHA3P29320 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 AL136116.3-201ENST00000402907 1138 ntBASIC19.99■□□□□ 0.79
EPHA3P29320 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.99■□□□□ 0.79
EPHA3P29320 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.99■□□□□ 0.79
EPHA3P29320 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
EPHA3P29320 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
EPHA3P29320 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
EPHA3P29320 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EPHA3P29320 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.98■□□□□ 0.79
EPHA3P29320 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms