Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YGL117WYGL117W 798 nt1.3□□□□□ -2.2
CDC39P25655 IMP3YHR148W 552 nt1.3□□□□□ -2.2
CDC39P25655 CAT8YMR280C 4302 nt1.29□□□□□ -2.2
CDC39P25655 YCR099CYCR099C 468 nt1.29□□□□□ -2.2
CDC39P25655 YDR203WYDR203W 318 nt1.29□□□□□ -2.2
CDC39P25655 ATP17YDR377W 306 nt1.29□□□□□ -2.2
CDC39P25655 RRF1YHR038W 693 nt1.29□□□□□ -2.2
CDC39P25655 TRX1YLR043C 312 nt1.29□□□□□ -2.2
CDC39P25655 PAI3YMR174C 207 nt1.29□□□□□ -2.2
CDC39P25655 LEU3YLR451W 2661 nt1.29□□□□□ -2.2
CDC39P25655 MGA2YIR033W 3342 nt1.29□□□□□ -2.2
CDC39P25655 PES4YFR023W 1836 nt1.29□□□□□ -2.2
CDC39P25655 DPP1YDR284C 870 nt1.28□□□□□ -2.2
CDC39P25655 YKL162CYKL162C 1209 nt1.28□□□□□ -2.2
CDC39P25655 YLR050CYLR050C 486 nt1.28□□□□□ -2.2
CDC39P25655 NYV1YLR093C 762 nt1.28□□□□□ -2.2
CDC39P25655 LIP2YLR239C 987 nt1.28□□□□□ -2.2
CDC39P25655 SPP381YBR152W 876 nt1.28□□□□□ -2.2
CDC39P25655 YPR089WYPR089W 2667 nt1.28□□□□□ -2.2
CDC39P25655 YDL163WYDL163W 303 nt1.28□□□□□ -2.2
CDC39P25655 YIL141WYIL141W 390 nt1.28□□□□□ -2.2
CDC39P25655 YKL070WYKL070W 510 nt1.28□□□□□ -2.2
CDC39P25655 GCN2YDR283C 4980 nt1.28□□□□□ -2.2
CDC39P25655 GCD2YGR083C 1956 nt1.27□□□□□ -2.21
CDC39P25655 ECM5YMR176W 4236 nt1.27□□□□□ -2.21
CDC39P25655 MSL5YLR116W 1431 nt1.27□□□□□ -2.21
CDC39P25655 KEI1YDR367W 666 nt1.27□□□□□ -2.21
CDC39P25655 YJR023CYJR023C 402 nt1.27□□□□□ -2.21
CDC39P25655 PDP3YLR455W 915 nt1.27□□□□□ -2.21
CDC39P25655 IRC21YMR073C 606 nt1.27□□□□□ -2.21
CDC39P25655 NGL1YOL042W 1092 nt1.27□□□□□ -2.21
CDC39P25655 snR191snR191 274 nt1.27□□□□□ -2.21
CDC39P25655 SPC72YAL047C 1869 nt1.27□□□□□ -2.21
CDC39P25655 BUD2YKL092C 3315 nt1.27□□□□□ -2.21
CDC39P25655 snR76snR76 109 nt1.27□□□□□ -2.21
CDC39P25655 DDI2YFL061W 678 nt1.27□□□□□ -2.21
CDC39P25655 RTT102YGR275W 474 nt1.27□□□□□ -2.21
CDC39P25655 SEN15YMR059W 387 nt1.27□□□□□ -2.21
CDC39P25655 TDA9YML081W 3756 nt1.26□□□□□ -2.21
CDC39P25655 UBC13YDR092W 462 nt1.26□□□□□ -2.21
CDC39P25655 YFR054CYFR054C 579 nt1.26□□□□□ -2.21
CDC39P25655 DSE2YHR143W 978 nt1.26□□□□□ -2.21
CDC39P25655 YIL012WYIL012W 342 nt1.26□□□□□ -2.21
CDC39P25655 YOR114WYOR114W 885 nt1.26□□□□□ -2.21
CDC39P25655 PIP2YOR363C 2991 nt1.26□□□□□ -2.21
CDC39P25655 ARL1YBR164C 552 nt1.26□□□□□ -2.21
CDC39P25655 RRP7YCL031C 894 nt1.26□□□□□ -2.21
CDC39P25655 UTP6YDR449C 1323 nt1.26□□□□□ -2.21
CDC39P25655 YHR214C-BYHR214C-B 5382 nt1.26□□□□□ -2.21
CDC39P25655 SHE4YOR035C 2370 nt1.26□□□□□ -2.21
CDC39P25655 RGA1YOR127W 3024 nt1.25□□□□□ -2.21
CDC39P25655 tQ(UUG)E2tQ(UUG)E2 72 nt1.25□□□□□ -2.21
CDC39P25655 PCL5YHR071W 690 nt1.25□□□□□ -2.21
CDC39P25655 YML003WYML003W 873 nt1.25□□□□□ -2.21
CDC39P25655 GPI2YPL076W 843 nt1.25□□□□□ -2.21
CDC39P25655 DAL5YJR152W 1632 nt1.25□□□□□ -2.21
CDC39P25655 SSP1YHR184W 1716 nt1.25□□□□□ -2.21
CDC39P25655 ASI3YNL008C 2031 nt1.25□□□□□ -2.21
CDC39P25655 YCR081C-AYCR081C-A 237 nt1.25□□□□□ -2.21
CDC39P25655 tH(GUG)E1tH(GUG)E1 72 nt1.25□□□□□ -2.21
CDC39P25655 tH(GUG)E2tH(GUG)E2 72 nt1.25□□□□□ -2.21
CDC39P25655 tH(GUG)G1tH(GUG)G1 72 nt1.25□□□□□ -2.21
CDC39P25655 tH(GUG)G2tH(GUG)G2 72 nt1.25□□□□□ -2.21
CDC39P25655 tH(GUG)HtH(GUG)H 72 nt1.25□□□□□ -2.21
CDC39P25655 tH(GUG)KtH(GUG)K 72 nt1.25□□□□□ -2.21
CDC39P25655 tH(GUG)MtH(GUG)M 72 nt1.25□□□□□ -2.21
CDC39P25655 YPS5YGL259W 498 nt1.25□□□□□ -2.21
CDC39P25655 HRI1YLR301W 735 nt1.25□□□□□ -2.21
CDC39P25655 ATG5YPL149W 885 nt1.25□□□□□ -2.21
CDC39P25655 CIN2YPL241C 807 nt1.25□□□□□ -2.21
CDC39P25655 DPB3YBR278W 606 nt1.25□□□□□ -2.21
CDC39P25655 TRL1YJL087C 2484 nt1.24□□□□□ -2.21
CDC39P25655 PAU3YCR104W 375 nt1.24□□□□□ -2.21
CDC39P25655 AIM23YJL131C 1071 nt1.24□□□□□ -2.21
CDC39P25655 RNP1YLL046C 750 nt1.24□□□□□ -2.21
CDC39P25655 YEL043WYEL043W 2871 nt1.24□□□□□ -2.21
CDC39P25655 CKA1YIL035C 1119 nt1.24□□□□□ -2.21
CDC39P25655 RPS17AYML024W 411 nt1.24□□□□□ -2.21
CDC39P25655 YNL046WYNL046W 519 nt1.24□□□□□ -2.21
CDC39P25655 YPL135C-AYPL135C-A 174 nt1.24□□□□□ -2.21
CDC39P25655 IRA2YOL081W 9240 nt1.24□□□□□ -2.21
CDC39P25655 YHR214C-CYHR214C-C 1437 nt1.23□□□□□ -2.21
CDC39P25655 AEP1YMR064W 1557 nt1.23□□□□□ -2.21
CDC39P25655 RKM1YPL208W 1752 nt1.23□□□□□ -2.21
CDC39P25655 DFG16YOR030W 1860 nt1.23□□□□□ -2.21
CDC39P25655 CAT2YML042W 2013 nt1.23□□□□□ -2.21
CDC39P25655 YGR130CYGR130C 2451 nt1.23□□□□□ -2.21
CDC39P25655 MMS21YEL019C 804 nt1.23□□□□□ -2.21
CDC39P25655 YGL069CYGL069C 465 nt1.23□□□□□ -2.21
CDC39P25655 DLT1YMR126C 1029 nt1.23□□□□□ -2.21
CDC39P25655 RPN8YOR261C 1017 nt1.23□□□□□ -2.21
CDC39P25655 SEF1YBL066C 3447 nt1.23□□□□□ -2.21
CDC39P25655 PET127YOR017W 2403 nt1.23□□□□□ -2.21
CDC39P25655 SSK2YNR031C 4740 nt1.23□□□□□ -2.21
CDC39P25655 PMD1YER132C 5262 nt1.23□□□□□ -2.21
CDC39P25655 YDR124WYDR124W 975 nt1.22□□□□□ -2.21
CDC39P25655 RPS17BYDR447C 411 nt1.22□□□□□ -2.21
CDC39P25655 TCA17YEL048C 459 nt1.22□□□□□ -2.21
CDC39P25655 PAU2YEL049W 363 nt1.22□□□□□ -2.21
CDC39P25655 PAU12YGR294W 363 nt1.22□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms