Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP24386 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.23■□□□□ 0.67
CHMP24386 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP24386 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP24386 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.23■□□□□ 0.67
CHMP24386 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.23■□□□□ 0.67
CHMP24386 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CHMP24386 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.23■□□□□ 0.67
CHMP24386 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP24386 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHMP24386 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP24386 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP24386 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CHMP24386 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP24386 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CHMP24386 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP24386 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP24386 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP24386 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP24386 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP24386 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP24386 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CHMP24386 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.22■□□□□ 0.67
CHMP24386 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CHMP24386 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP24386 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP24386 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP24386 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CHMP24386 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP24386 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP24386 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP24386 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP24386 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP24386 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP24386 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.21■□□□□ 0.67
CHMP24386 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP24386 GABARAPL3-202ENST00000624044 1851 ntBASIC19.21■□□□□ 0.67
CHMP24386 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP24386 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP24386 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP24386 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP24386 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP24386 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
CHMP24386 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHMP24386 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.2■□□□□ 0.66
CHMP24386 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.2■□□□□ 0.66
CHMP24386 AC137761.2-201ENST00000561729 223 ntBASIC19.2■□□□□ 0.66
CHMP24386 AC145350.3-201ENST00000569033 163 ntBASIC19.2■□□□□ 0.66
CHMP24386 AC104187.1-201ENST00000607510 612 ntBASIC19.2■□□□□ 0.66
CHMP24386 IKBKGP1-201ENST00000612193 1073 ntBASIC19.2■□□□□ 0.66
CHMP24386 AP005212.1-201ENST00000581547 1997 ntBASIC19.2■□□□□ 0.66
CHMP24386 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP24386 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 AC006128.1-201ENST00000624704 1661 ntBASIC19.2■□□□□ 0.66
CHMP24386 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHMP24386 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP24386 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CHMP24386 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CHMP24386 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.19■□□□□ 0.66
CHMP24386 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.19■□□□□ 0.66
CHMP24386 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP24386 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 AC016769.1-201ENST00000409132 1010 ntBASIC19.19■□□□□ 0.66
CHMP24386 AC053503.5-201ENST00000601508 636 ntBASIC19.19■□□□□ 0.66
CHMP24386 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHMP24386 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
CHMP24386 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CHMP24386 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.19■□□□□ 0.66
CHMP24386 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
CHMP24386 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP24386 AC073314.1-201ENST00000568729 2216 ntBASIC19.19■□□□□ 0.66
CHMP24386 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms