Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDH1P12830 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
CDH1P12830 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.08■□□□□ 0.8
CDH1P12830 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CDH1P12830 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.07■□□□□ 0.8
CDH1P12830 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDH1P12830 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.07■□□□□ 0.8
CDH1P12830 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH1P12830 MYCNOS-205ENST00000641950 531 ntBASIC20.07■□□□□ 0.8
CDH1P12830 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDH1P12830 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.07■□□□□ 0.8
CDH1P12830 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH1P12830 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CDH1P12830 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CDH1P12830 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH1P12830 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH1P12830 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH1P12830 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH1P12830 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH1P12830 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH1P12830 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH1P12830 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDH1P12830 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH1P12830 AC016769.1-201ENST00000409132 1010 ntBASIC20.06■□□□□ 0.8
CDH1P12830 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH1P12830 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.06■□□□□ 0.8
CDH1P12830 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.06■□□□□ 0.8
CDH1P12830 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.06■□□□□ 0.8
CDH1P12830 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CDH1P12830 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH1P12830 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH1P12830 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH1P12830 LINC01006-201ENST00000333319 2292 ntBASIC20.05■□□□□ 0.8
CDH1P12830 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH1P12830 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH1P12830 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH1P12830 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH1P12830 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH1P12830 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH1P12830 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH1P12830 AC245052.3-201ENST00000450182 901 ntBASIC20.05■□□□□ 0.8
CDH1P12830 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.05■□□□□ 0.8
CDH1P12830 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH1P12830 AC022517.1-201ENST00000592429 346 ntBASIC20.05■□□□□ 0.8
CDH1P12830 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.05■□□□□ 0.8
CDH1P12830 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH1P12830 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH1P12830 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.05■□□□□ 0.8
CDH1P12830 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH1P12830 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.05■□□□□ 0.8
CDH1P12830 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH1P12830 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CDH1P12830 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH1P12830 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH1P12830 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH1P12830 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH1P12830 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.04■□□□□ 0.8
CDH1P12830 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH1P12830 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH1P12830 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH1P12830 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.04■□□□□ 0.8
CDH1P12830 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH1P12830 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.04■□□□□ 0.8
CDH1P12830 RARRES2P11-201ENST00000635158 484 ntBASIC20.04■□□□□ 0.8
CDH1P12830 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH1P12830 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH1P12830 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH1P12830 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.04■□□□□ 0.8
CDH1P12830 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH1P12830 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH1P12830 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH1P12830 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH1P12830 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH1P12830 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH1P12830 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH1P12830 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH1P12830 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH1P12830 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH1P12830 SLC7A5P1-201ENST00000568957 537 ntBASIC20.03■□□□□ 0.8
CDH1P12830 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH1P12830 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH1P12830 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH1P12830 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH1P12830 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDH1P12830 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH1P12830 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDH1P12830 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms