Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CSB-PGBD3P0DP91 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 AC124016.1-201ENST00000609552 612 ntBASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 AC010331.1-201ENST00000611423 582 ntBASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
CSB-PGBD3P0DP91 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 AC239809.2-201ENST00000415381 517 ntBASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
CSB-PGBD3P0DP91 KRT17P2-201ENST00000300992 1314 ntBASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 GGT1-206ENST00000404223 952 ntTSL 2 BASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 SERF2-207ENST00000409614 582 ntTSL 2 BASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 ABHD17AP6-201ENST00000458502 1044 ntBASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CSB-PGBD3P0DP91 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 C1orf229-201ENST00000623686 2258 ntBASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 AC127496.7-201ENST00000625110 1798 ntBASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 AC006557.6-201ENST00000623071 864 ntBASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CSB-PGBD3P0DP91 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
CSB-PGBD3P0DP91 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC27.45■■□□□ 1.99
CSB-PGBD3P0DP91 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC27.45■■□□□ 1.99
CSB-PGBD3P0DP91 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CSB-PGBD3P0DP91 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC27.45■■□□□ 1.98
CSB-PGBD3P0DP91 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC27.45■■□□□ 1.98
CSB-PGBD3P0DP91 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC27.45■■□□□ 1.98
CSB-PGBD3P0DP91 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC27.45■■□□□ 1.98
CSB-PGBD3P0DP91 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC27.45■■□□□ 1.98
CSB-PGBD3P0DP91 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 AL049637.2-201ENST00000641778 930 ntBASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.44■■□□□ 1.98
CSB-PGBD3P0DP91 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC27.43■■□□□ 1.98
CSB-PGBD3P0DP91 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC27.43■■□□□ 1.98
CSB-PGBD3P0DP91 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
CSB-PGBD3P0DP91 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
CSB-PGBD3P0DP91 AC133681.1-201ENST00000465482 601 ntBASIC27.43■■□□□ 1.98
CSB-PGBD3P0DP91 AC120498.8-201ENST00000614275 531 ntBASIC27.43■■□□□ 1.98
CSB-PGBD3P0DP91 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CSB-PGBD3P0DP91 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CSB-PGBD3P0DP91 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CSB-PGBD3P0DP91 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC27.43■■□□□ 1.98
CSB-PGBD3P0DP91 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
CSB-PGBD3P0DP91 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC27.42■■□□□ 1.98
CSB-PGBD3P0DP91 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CSB-PGBD3P0DP91 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms