Protein–RNA interactions for Protein: P0DJI8

SAA1, Serum amyloid A-1 protein, humanhuman

Predicted RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1P0DJI8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SAA1P0DJI8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SAA1P0DJI8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SAA1P0DJI8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SAA1P0DJI8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.59■□□□□ 0.25
SAA1P0DJI8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SAA1P0DJI8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SAA1P0DJI8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SAA1P0DJI8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.59■□□□□ 0.25
SAA1P0DJI8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.59■□□□□ 0.25
SAA1P0DJI8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SAA1P0DJI8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SAA1P0DJI8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.59■□□□□ 0.25
SAA1P0DJI8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.59■□□□□ 0.25
SAA1P0DJI8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SAA1P0DJI8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SAA1P0DJI8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SAA1P0DJI8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SAA1P0DJI8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SAA1P0DJI8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.59■□□□□ 0.25
SAA1P0DJI8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SAA1P0DJI8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.59■□□□□ 0.25
SAA1P0DJI8 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.59■□□□□ 0.25
SAA1P0DJI8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SAA1P0DJI8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SAA1P0DJI8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SAA1P0DJI8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SAA1P0DJI8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.58■□□□□ 0.25
SAA1P0DJI8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SAA1P0DJI8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.58■□□□□ 0.24
SAA1P0DJI8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 CCDC92B-201ENST00000575506 885 ntBASIC16.58■□□□□ 0.24
SAA1P0DJI8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.58■□□□□ 0.24
SAA1P0DJI8 RARRES2P11-201ENST00000635158 484 ntBASIC16.58■□□□□ 0.24
SAA1P0DJI8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SAA1P0DJI8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.58■□□□□ 0.24
SAA1P0DJI8 AC027702.1-201ENST00000563810 1770 ntBASIC16.58■□□□□ 0.24
SAA1P0DJI8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SAA1P0DJI8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SAA1P0DJI8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.57■□□□□ 0.24
SAA1P0DJI8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SAA1P0DJI8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SAA1P0DJI8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
SAA1P0DJI8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SAA1P0DJI8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
SAA1P0DJI8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SAA1P0DJI8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.57■□□□□ 0.24
SAA1P0DJI8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SAA1P0DJI8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SAA1P0DJI8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SAA1P0DJI8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.57■□□□□ 0.24
SAA1P0DJI8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.57■□□□□ 0.24
SAA1P0DJI8 AP001160.3-201ENST00000601484 763 ntBASIC16.57■□□□□ 0.24
SAA1P0DJI8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SAA1P0DJI8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SAA1P0DJI8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SAA1P0DJI8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SAA1P0DJI8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SAA1P0DJI8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SAA1P0DJI8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SAA1P0DJI8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SAA1P0DJI8 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 KRT18P14-201ENST00000534205 1250 ntBASIC16.56■□□□□ 0.24
SAA1P0DJI8 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SAA1P0DJI8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SAA1P0DJI8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.56■□□□□ 0.24
SAA1P0DJI8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SAA1P0DJI8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SAA1P0DJI8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SAA1P0DJI8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SAA1P0DJI8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SAA1P0DJI8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SAA1P0DJI8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.55■□□□□ 0.24
SAA1P0DJI8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms