Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN1P07384 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN1P07384 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.25■□□□□ 0.83
CAPN1P07384 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CAPN1P07384 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.25■□□□□ 0.83
CAPN1P07384 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.25■□□□□ 0.83
CAPN1P07384 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN1P07384 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN1P07384 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN1P07384 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN1P07384 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CAPN1P07384 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN1P07384 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN1P07384 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN1P07384 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN1P07384 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.24■□□□□ 0.83
CAPN1P07384 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CAPN1P07384 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN1P07384 KRT18P11-201ENST00000435214 1283 ntBASIC20.24■□□□□ 0.83
CAPN1P07384 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.24■□□□□ 0.83
CAPN1P07384 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.24■□□□□ 0.83
CAPN1P07384 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.24■□□□□ 0.83
CAPN1P07384 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN1P07384 PLK5-205ENST00000642079 1969 ntBASIC20.24■□□□□ 0.83
CAPN1P07384 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CAPN1P07384 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN1P07384 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN1P07384 AC073130.3-201ENST00000624389 2278 ntBASIC20.24■□□□□ 0.83
CAPN1P07384 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CAPN1P07384 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN1P07384 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN1P07384 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN1P07384 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.23■□□□□ 0.83
CAPN1P07384 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.23■□□□□ 0.83
CAPN1P07384 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN1P07384 HLA-L-209ENST00000420110 1011 ntBASIC20.23■□□□□ 0.83
CAPN1P07384 AC026185.1-201ENST00000445748 174 ntBASIC20.23■□□□□ 0.83
CAPN1P07384 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.23■□□□□ 0.83
CAPN1P07384 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CAPN1P07384 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN1P07384 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.23■□□□□ 0.83
CAPN1P07384 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.23■□□□□ 0.83
CAPN1P07384 AC011767.1-201ENST00000617410 1153 ntBASIC20.23■□□□□ 0.83
CAPN1P07384 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN1P07384 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.23■□□□□ 0.83
CAPN1P07384 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CAPN1P07384 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN1P07384 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN1P07384 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CAPN1P07384 AC006128.1-201ENST00000624704 1661 ntBASIC20.22■□□□□ 0.83
CAPN1P07384 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.22■□□□□ 0.83
CAPN1P07384 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN1P07384 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN1P07384 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN1P07384 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN1P07384 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.22■□□□□ 0.83
CAPN1P07384 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CAPN1P07384 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.22■□□□□ 0.83
CAPN1P07384 SLC25A24-204ENST00000569674 2357 ntBASIC20.22■□□□□ 0.83
CAPN1P07384 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN1P07384 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN1P07384 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN1P07384 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN1P07384 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.22■□□□□ 0.83
CAPN1P07384 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.22■□□□□ 0.83
CAPN1P07384 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN1P07384 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN1P07384 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CAPN1P07384 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN1P07384 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.21■□□□□ 0.83
CAPN1P07384 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN1P07384 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CAPN1P07384 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN1P07384 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.21■□□□□ 0.83
CAPN1P07384 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.21■□□□□ 0.83
CAPN1P07384 CROCCP5-201ENST00000436658 830 ntBASIC20.21■□□□□ 0.83
CAPN1P07384 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN1P07384 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.21■□□□□ 0.83
CAPN1P07384 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.21■□□□□ 0.83
CAPN1P07384 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN1P07384 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN1P07384 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CAPN1P07384 LINC01521-201ENST00000504184 1943 ntBASIC20.21■□□□□ 0.83
CAPN1P07384 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN1P07384 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN1P07384 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN1P07384 LINC01006-201ENST00000333319 2292 ntBASIC20.2■□□□□ 0.82
CAPN1P07384 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPN1P07384 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPN1P07384 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.2■□□□□ 0.82
CAPN1P07384 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CAPN1P07384 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN1P07384 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.2■□□□□ 0.82
CAPN1P07384 MFSD11-216ENST00000590393 1141 ntBASIC20.2■□□□□ 0.82
CAPN1P07384 FEM1AP1-201ENST00000431297 1995 ntBASIC20.2■□□□□ 0.82
CAPN1P07384 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPN1P07384 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN1P07384 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPN1P07384 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN1P07384 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms