Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD3DP04234 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD3DP04234 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.48■□□□□ 0.39
CD3DP04234 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD3DP04234 MIR6724-1-201ENST00000616420 92 ntBASIC17.48■□□□□ 0.39
CD3DP04234 MIR6724-2-201ENST00000616483 92 ntBASIC17.48■□□□□ 0.39
CD3DP04234 MIR6724-4-201ENST00000617390 92 ntBASIC17.48■□□□□ 0.39
CD3DP04234 MIR6724-3-201ENST00000622482 92 ntBASIC17.48■□□□□ 0.39
CD3DP04234 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD3DP04234 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD3DP04234 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.48■□□□□ 0.39
CD3DP04234 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD3DP04234 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD3DP04234 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD3DP04234 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD3DP04234 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.48■□□□□ 0.39
CD3DP04234 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.48■□□□□ 0.39
CD3DP04234 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD3DP04234 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.47■□□□□ 0.39
CD3DP04234 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 TCF3P1-201ENST00000423021 1937 ntBASIC17.47■□□□□ 0.39
CD3DP04234 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.47■□□□□ 0.39
CD3DP04234 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.47■□□□□ 0.39
CD3DP04234 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.47■□□□□ 0.39
CD3DP04234 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.47■□□□□ 0.39
CD3DP04234 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 BX323043.1-201ENST00000641006 1765 ntBASIC17.47■□□□□ 0.39
CD3DP04234 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CD3DP04234 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CD3DP04234 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD3DP04234 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD3DP04234 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.46■□□□□ 0.39
CD3DP04234 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD3DP04234 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD3DP04234 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.46■□□□□ 0.39
CD3DP04234 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CD3DP04234 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.46■□□□□ 0.39
CD3DP04234 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CD3DP04234 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD3DP04234 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD3DP04234 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD3DP04234 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CD3DP04234 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD3DP04234 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.46■□□□□ 0.39
CD3DP04234 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CD3DP04234 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD3DP04234 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD3DP04234 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD3DP04234 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD3DP04234 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD3DP04234 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CD3DP04234 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CD3DP04234 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD3DP04234 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.45■□□□□ 0.38
CD3DP04234 AC239859.2-201ENST00000444165 318 ntBASIC17.45■□□□□ 0.38
CD3DP04234 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.45■□□□□ 0.38
CD3DP04234 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD3DP04234 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD3DP04234 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD3DP04234 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CD3DP04234 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD3DP04234 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD3DP04234 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD3DP04234 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.44■□□□□ 0.38
CD3DP04234 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.44■□□□□ 0.38
CD3DP04234 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD3DP04234 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.44■□□□□ 0.38
CD3DP04234 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CD3DP04234 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD3DP04234 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD3DP04234 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CD3DP04234 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD3DP04234 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.44■□□□□ 0.38
CD3DP04234 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CD3DP04234 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CD3DP04234 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.44■□□□□ 0.38
CD3DP04234 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD3DP04234 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD3DP04234 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.44■□□□□ 0.38
CD3DP04234 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD3DP04234 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.44■□□□□ 0.38
CD3DP04234 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.44■□□□□ 0.38
CD3DP04234 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.44■□□□□ 0.38
CD3DP04234 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD3DP04234 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD3DP04234 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD3DP04234 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD3DP04234 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD3DP04234 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms