Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
APOBP04114 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBP04114 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBP04114 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBP04114 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.03□□□□□ -0.32
APOBP04114 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOBP04114 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC13.03□□□□□ -0.32
APOBP04114 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.03□□□□□ -0.32
APOBP04114 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBP04114 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
APOBP04114 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
APOBP04114 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
APOBP04114 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
APOBP04114 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.02□□□□□ -0.32
APOBP04114 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.02□□□□□ -0.32
APOBP04114 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.02□□□□□ -0.32
APOBP04114 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.02□□□□□ -0.32
APOBP04114 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.02□□□□□ -0.32
APOBP04114 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.02□□□□□ -0.32
APOBP04114 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
APOBP04114 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
APOBP04114 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
APOBP04114 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC13.02□□□□□ -0.32
APOBP04114 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
APOBP04114 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.02□□□□□ -0.33
APOBP04114 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.02□□□□□ -0.33
APOBP04114 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.02□□□□□ -0.33
APOBP04114 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
APOBP04114 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOBP04114 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC13.02□□□□□ -0.33
APOBP04114 AC068473.5-201ENST00000616428 2072 ntBASIC13.02□□□□□ -0.33
APOBP04114 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOBP04114 CDV3P1-201ENST00000471403 739 ntBASIC13.02□□□□□ -0.33
APOBP04114 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.02□□□□□ -0.33
APOBP04114 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.02□□□□□ -0.33
APOBP04114 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.02□□□□□ -0.33
APOBP04114 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
APOBP04114 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC13.02□□□□□ -0.33
APOBP04114 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 NTF6B-201ENST00000591913 560 ntBASIC13.01□□□□□ -0.33
APOBP04114 AP000525.1-201ENST00000608286 694 ntBASIC13.01□□□□□ -0.33
APOBP04114 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 AC092053.2-201ENST00000640557 1818 ntBASIC13.01□□□□□ -0.33
APOBP04114 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APOBP04114 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 MMP23A-201ENST00000234610 1017 ntBASIC13.01□□□□□ -0.33
APOBP04114 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.01□□□□□ -0.33
APOBP04114 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC13.01□□□□□ -0.33
APOBP04114 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
APOBP04114 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APOBP04114 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.01□□□□□ -0.33
APOBP04114 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 AC010542.4-201ENST00000563151 1910 ntBASIC13.01□□□□□ -0.33
APOBP04114 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBP04114 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC13□□□□□ -0.33
APOBP04114 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOBP04114 CYP21A1P-202ENST00000354927 1481 ntBASIC13□□□□□ -0.33
APOBP04114 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13□□□□□ -0.33
APOBP04114 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13□□□□□ -0.33
APOBP04114 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOBP04114 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
APOBP04114 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOBP04114 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOBP04114 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
APOBP04114 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
APOBP04114 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13□□□□□ -0.33
APOBP04114 AL049597.2-201ENST00000565575 961 ntBASIC13□□□□□ -0.33
APOBP04114 AC124283.5-201ENST00000624661 1809 ntBASIC13□□□□□ -0.33
APOBP04114 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOBP04114 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOBP04114 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
APOBP04114 MCRIP2P1-201ENST00000394346 511 ntBASIC13□□□□□ -0.33
APOBP04114 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13□□□□□ -0.33
APOBP04114 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOBP04114 AC006011.2-201ENST00000621313 1158 ntBASIC13□□□□□ -0.33
APOBP04114 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOBP04114 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOBP04114 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
APOBP04114 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13□□□□□ -0.33
APOBP04114 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
APOBP04114 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBP04114 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBP04114 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBP04114 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBP04114 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBP04114 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBP04114 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBP04114 NARF-205ENST00000412079 1760 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms