Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6AP02538 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6AP02538 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6AP02538 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6AP02538 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6AP02538 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6AP02538 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6AP02538 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT6AP02538 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
KRT6AP02538 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6AP02538 DUX4L2-201ENST00000561772 1275 ntBASIC19.93■□□□□ 0.78
KRT6AP02538 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT6AP02538 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
KRT6AP02538 DUX4L6-201ENST00000626483 1275 ntBASIC19.93■□□□□ 0.78
KRT6AP02538 DUX4L1-201ENST00000627662 1275 ntBASIC19.93■□□□□ 0.78
KRT6AP02538 DUX4L8-201ENST00000629013 1275 ntBASIC19.93■□□□□ 0.78
KRT6AP02538 DUX4L3-201ENST00000630187 1275 ntBASIC19.93■□□□□ 0.78
KRT6AP02538 DUX4L7-201ENST00000630678 1275 ntBASIC19.93■□□□□ 0.78
KRT6AP02538 DUX4L5-201ENST00000630834 1275 ntBASIC19.93■□□□□ 0.78
KRT6AP02538 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6AP02538 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
KRT6AP02538 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6AP02538 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6AP02538 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT6AP02538 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6AP02538 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
KRT6AP02538 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT6AP02538 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6AP02538 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6AP02538 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6AP02538 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT6AP02538 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6AP02538 YBX1P1-201ENST00000445822 960 ntBASIC19.92■□□□□ 0.78
KRT6AP02538 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT6AP02538 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6AP02538 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.92■□□□□ 0.78
KRT6AP02538 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT6AP02538 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT6AP02538 AC073314.1-201ENST00000568729 2216 ntBASIC19.92■□□□□ 0.78
KRT6AP02538 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6AP02538 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
KRT6AP02538 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
KRT6AP02538 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6AP02538 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6AP02538 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6AP02538 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT6AP02538 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT6AP02538 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
KRT6AP02538 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT6AP02538 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
KRT6AP02538 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT6AP02538 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT6AP02538 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6AP02538 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT6AP02538 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT6AP02538 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6AP02538 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT6AP02538 AC104187.1-201ENST00000607510 612 ntBASIC19.91■□□□□ 0.78
KRT6AP02538 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT6AP02538 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6AP02538 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KRT6AP02538 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6AP02538 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6AP02538 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6AP02538 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6AP02538 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6AP02538 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6AP02538 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT6AP02538 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT6AP02538 FP700111.2-201ENST00000619190 1892 ntBASIC19.9■□□□□ 0.78
KRT6AP02538 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.9■□□□□ 0.78
KRT6AP02538 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KRT6AP02538 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KRT6AP02538 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 TERF1P2-201ENST00000583350 1212 ntBASIC19.9■□□□□ 0.78
KRT6AP02538 RARRES2P11-201ENST00000635158 484 ntBASIC19.9■□□□□ 0.78
KRT6AP02538 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT6AP02538 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT6AP02538 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
KRT6AP02538 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6AP02538 AC092667.1-201ENST00000434301 2586 ntBASIC19.9■□□□□ 0.78
KRT6AP02538 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.89■□□□□ 0.78
KRT6AP02538 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT6AP02538 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT6AP02538 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT6AP02538 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.89■□□□□ 0.77
KRT6AP02538 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT6AP02538 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT6AP02538 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms