Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DQB1P01920 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.83■□□□□ 0.44
HLA-DQB1P01920 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DQB1P01920 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DQB1P01920 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 AC005332.7-201ENST00000614046 2005 ntBASIC17.82■□□□□ 0.44
HLA-DQB1P01920 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DQB1P01920 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DQB1P01920 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB1P01920 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DQB1P01920 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB1P01920 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DQB1P01920 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB1P01920 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB1P01920 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.8■□□□□ 0.44
HLA-DQB1P01920 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DQB1P01920 UNC93B8-201ENST00000511903 705 ntBASIC17.8■□□□□ 0.44
HLA-DQB1P01920 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DQB1P01920 AP006587.3-201ENST00000525742 1516 ntBASIC17.8■□□□□ 0.44
HLA-DQB1P01920 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DQB1P01920 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DQB1P01920 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DQB1P01920 FP700111.2-201ENST00000619190 1892 ntBASIC17.8■□□□□ 0.44
HLA-DQB1P01920 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DQB1P01920 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 NEFHP1-201ENST00000412845 2629 ntBASIC17.78■□□□□ 0.44
HLA-DQB1P01920 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HLA-DQB1P01920 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms