Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
GGPS1O95749 CYP21A1P-202ENST00000354927 1481 ntBASIC23.24■■□□□ 1.31
GGPS1O95749 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.23■■□□□ 1.31
GGPS1O95749 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
GGPS1O95749 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.23■■□□□ 1.31
GGPS1O95749 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
GGPS1O95749 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
GGPS1O95749 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.23■■□□□ 1.31
GGPS1O95749 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
GGPS1O95749 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.23■■□□□ 1.31
GGPS1O95749 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
GGPS1O95749 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.23■■□□□ 1.31
GGPS1O95749 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
GGPS1O95749 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
GGPS1O95749 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
GGPS1O95749 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
GGPS1O95749 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
GGPS1O95749 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
GGPS1O95749 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
GGPS1O95749 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.22■■□□□ 1.31
GGPS1O95749 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
GGPS1O95749 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.22■■□□□ 1.31
GGPS1O95749 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.22■■□□□ 1.31
GGPS1O95749 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
GGPS1O95749 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
GGPS1O95749 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
GGPS1O95749 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
GGPS1O95749 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
GGPS1O95749 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.22■■□□□ 1.31
GGPS1O95749 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
GGPS1O95749 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.21■■□□□ 1.31
GGPS1O95749 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GGPS1O95749 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
GGPS1O95749 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GGPS1O95749 UNC93B5-201ENST00000530315 699 ntBASIC23.21■■□□□ 1.31
GGPS1O95749 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GGPS1O95749 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.21■■□□□ 1.31
GGPS1O95749 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
GGPS1O95749 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GGPS1O95749 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
GGPS1O95749 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
GGPS1O95749 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.21■■□□□ 1.31
GGPS1O95749 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
GGPS1O95749 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.21■■□□□ 1.31
GGPS1O95749 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GGPS1O95749 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.21■■□□□ 1.31
GGPS1O95749 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
GGPS1O95749 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
GGPS1O95749 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.31
GGPS1O95749 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
GGPS1O95749 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GGPS1O95749 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.2■■□□□ 1.3
GGPS1O95749 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GGPS1O95749 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
GGPS1O95749 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GGPS1O95749 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.2■■□□□ 1.3
GGPS1O95749 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
GGPS1O95749 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.2■■□□□ 1.3
GGPS1O95749 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.2■■□□□ 1.3
GGPS1O95749 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.2■■□□□ 1.3
GGPS1O95749 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GGPS1O95749 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
GGPS1O95749 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.2■■□□□ 1.3
GGPS1O95749 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GGPS1O95749 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GGPS1O95749 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GGPS1O95749 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
GGPS1O95749 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
GGPS1O95749 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.19■■□□□ 1.3
GGPS1O95749 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
GGPS1O95749 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.19■■□□□ 1.3
GGPS1O95749 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GGPS1O95749 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.19■■□□□ 1.3
GGPS1O95749 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.19■■□□□ 1.3
GGPS1O95749 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
GGPS1O95749 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
GGPS1O95749 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GGPS1O95749 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
GGPS1O95749 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.19■■□□□ 1.3
GGPS1O95749 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
GGPS1O95749 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.19■■□□□ 1.3
GGPS1O95749 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
GGPS1O95749 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
GGPS1O95749 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
GGPS1O95749 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
GGPS1O95749 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GGPS1O95749 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GGPS1O95749 AC006058.3-201ENST00000606217 1069 ntBASIC23.18■■□□□ 1.3
GGPS1O95749 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GGPS1O95749 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GGPS1O95749 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.18■■□□□ 1.3
GGPS1O95749 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
GGPS1O95749 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.18■■□□□ 1.3
GGPS1O95749 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GGPS1O95749 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
GGPS1O95749 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GGPS1O95749 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GGPS1O95749 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
GGPS1O95749 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
GGPS1O95749 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms