Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT1O95170 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CDRT1O95170 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT1O95170 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDRT1O95170 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT1O95170 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT1O95170 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
CDRT1O95170 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.36■□□□□ 0.53
CDRT1O95170 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT1O95170 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT1O95170 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.36■□□□□ 0.53
CDRT1O95170 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT1O95170 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDRT1O95170 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.36■□□□□ 0.53
CDRT1O95170 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.36■□□□□ 0.53
CDRT1O95170 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT1O95170 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.36■□□□□ 0.53
CDRT1O95170 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT1O95170 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.36■□□□□ 0.53
CDRT1O95170 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.36■□□□□ 0.53
CDRT1O95170 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT1O95170 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT1O95170 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT1O95170 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT1O95170 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDRT1O95170 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT1O95170 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT1O95170 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT1O95170 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDRT1O95170 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.35■□□□□ 0.53
CDRT1O95170 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.35■□□□□ 0.53
CDRT1O95170 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDRT1O95170 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.35■□□□□ 0.53
CDRT1O95170 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.35■□□□□ 0.53
CDRT1O95170 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDRT1O95170 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT1O95170 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDRT1O95170 AC068587.7-201ENST00000641602 218 ntBASIC18.35■□□□□ 0.53
CDRT1O95170 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT1O95170 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT1O95170 AC098818.2-201ENST00000564925 2320 ntBASIC18.35■□□□□ 0.53
CDRT1O95170 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT1O95170 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.35■□□□□ 0.53
CDRT1O95170 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT1O95170 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT1O95170 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT1O95170 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDRT1O95170 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
CDRT1O95170 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.34■□□□□ 0.53
CDRT1O95170 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDRT1O95170 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CDRT1O95170 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 GUSBP5-201ENST00000418136 578 ntBASIC18.34■□□□□ 0.53
CDRT1O95170 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.34■□□□□ 0.53
CDRT1O95170 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 MIR3621-201ENST00000580529 85 ntBASIC18.34■□□□□ 0.53
CDRT1O95170 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.34■□□□□ 0.53
CDRT1O95170 BX323043.1-201ENST00000641006 1765 ntBASIC18.34■□□□□ 0.53
CDRT1O95170 AC116562.4-201ENST00000641316 2276 ntBASIC18.34■□□□□ 0.53
CDRT1O95170 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDRT1O95170 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT1O95170 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.34■□□□□ 0.53
CDRT1O95170 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDRT1O95170 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.34■□□□□ 0.53
CDRT1O95170 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDRT1O95170 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CDRT1O95170 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
CDRT1O95170 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CDRT1O95170 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDRT1O95170 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
CDRT1O95170 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDRT1O95170 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDRT1O95170 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDRT1O95170 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.32■□□□□ 0.52
CDRT1O95170 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDRT1O95170 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDRT1O95170 SRD5A1P1-201ENST00000442297 786 ntBASIC18.32■□□□□ 0.52
CDRT1O95170 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.32■□□□□ 0.52
CDRT1O95170 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDRT1O95170 AC087239.1-201ENST00000622671 572 ntBASIC18.32■□□□□ 0.52
CDRT1O95170 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.32■□□□□ 0.52
CDRT1O95170 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDRT1O95170 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CDRT1O95170 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDRT1O95170 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDRT1O95170 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDRT1O95170 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDRT1O95170 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDRT1O95170 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDRT1O95170 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms