Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC32.43■■■□□ 2.78
PCF11O94913 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
PCF11O94913 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
PCF11O94913 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
PCF11O94913 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
PCF11O94913 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC32.42■■■□□ 2.78
PCF11O94913 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC32.42■■■□□ 2.78
PCF11O94913 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC32.42■■■□□ 2.78
PCF11O94913 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
PCF11O94913 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC32.42■■■□□ 2.78
PCF11O94913 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC32.42■■■□□ 2.78
PCF11O94913 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
PCF11O94913 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
PCF11O94913 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC32.41■■■□□ 2.78
PCF11O94913 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC32.41■■■□□ 2.78
PCF11O94913 AL359736.2-201ENST00000621992 437 ntBASIC32.41■■■□□ 2.78
PCF11O94913 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PCF11O94913 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PCF11O94913 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
PCF11O94913 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PCF11O94913 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC32.41■■■□□ 2.78
PCF11O94913 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC32.41■■■□□ 2.78
PCF11O94913 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC32.41■■■□□ 2.78
PCF11O94913 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PCF11O94913 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC32.41■■■□□ 2.78
PCF11O94913 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC32.41■■■□□ 2.78
PCF11O94913 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC32.41■■■□□ 2.78
PCF11O94913 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
PCF11O94913 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
PCF11O94913 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC32.4■■■□□ 2.78
PCF11O94913 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
PCF11O94913 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
PCF11O94913 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
PCF11O94913 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.78
PCF11O94913 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
PCF11O94913 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PCF11O94913 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC32.39■■■□□ 2.78
PCF11O94913 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
PCF11O94913 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC32.39■■■□□ 2.78
PCF11O94913 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PCF11O94913 AC008550.1-201ENST00000511500 884 ntBASIC32.39■■■□□ 2.78
PCF11O94913 RNF121-214ENST00000533380 870 ntTSL 3 BASIC32.39■■■□□ 2.78
PCF11O94913 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC32.39■■■□□ 2.78
PCF11O94913 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC32.39■■■□□ 2.78
PCF11O94913 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PCF11O94913 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC32.39■■■□□ 2.77
PCF11O94913 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PCF11O94913 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PCF11O94913 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PCF11O94913 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC32.38■■■□□ 2.77
PCF11O94913 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC32.38■■■□□ 2.77
PCF11O94913 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC32.38■■■□□ 2.77
PCF11O94913 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC32.38■■■□□ 2.77
PCF11O94913 AL356652.1-201ENST00000615962 565 ntBASIC32.38■■■□□ 2.77
PCF11O94913 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PCF11O94913 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC32.38■■■□□ 2.77
PCF11O94913 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC32.38■■■□□ 2.77
PCF11O94913 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC32.38■■■□□ 2.77
PCF11O94913 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC32.38■■■□□ 2.77
PCF11O94913 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC32.38■■■□□ 2.77
PCF11O94913 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PCF11O94913 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
PCF11O94913 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PCF11O94913 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC32.37■■■□□ 2.77
PCF11O94913 CRK-204ENST00000574295 1391 ntTSL 5 BASIC32.37■■■□□ 2.77
PCF11O94913 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC32.37■■■□□ 2.77
PCF11O94913 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PCF11O94913 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
PCF11O94913 MFF-205ENST00000354503 1085 ntTSL 2 BASIC32.36■■■□□ 2.77
PCF11O94913 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
PCF11O94913 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC32.36■■■□□ 2.77
PCF11O94913 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC32.36■■■□□ 2.77
PCF11O94913 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC32.36■■■□□ 2.77
PCF11O94913 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
PCF11O94913 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PCF11O94913 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PCF11O94913 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
PCF11O94913 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
PCF11O94913 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PCF11O94913 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
PCF11O94913 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
PCF11O94913 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PCF11O94913 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
PCF11O94913 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC32.35■■■□□ 2.77
PCF11O94913 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
PCF11O94913 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PCF11O94913 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC32.35■■■□□ 2.77
PCF11O94913 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC32.35■■■□□ 2.77
PCF11O94913 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC32.35■■■□□ 2.77
PCF11O94913 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
PCF11O94913 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC32.35■■■□□ 2.77
PCF11O94913 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PCF11O94913 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC32.34■■■□□ 2.77
PCF11O94913 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC32.34■■■□□ 2.77
PCF11O94913 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
PCF11O94913 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
PCF11O94913 HES2-205ENST00000487437 968 ntTSL 3 BASIC32.34■■■□□ 2.77
PCF11O94913 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC32.34■■■□□ 2.77
PCF11O94913 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
PCF11O94913 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms