Protein–RNA interactions for Protein: O75962

TRIO, Triple functional domain protein, humanhuman

Predictions only

Length 3,097 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOO75962 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIOO75962 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIOO75962 NUDT16P1-203ENST00000513809 620 ntBASIC21.21■□□□□ 0.99
TRIOO75962 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIOO75962 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TRIOO75962 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIOO75962 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIOO75962 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIOO75962 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIOO75962 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.2■□□□□ 0.99
TRIOO75962 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIOO75962 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIOO75962 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIOO75962 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRIOO75962 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRIOO75962 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIOO75962 UPK3BP1-201ENST00000428678 509 ntBASIC21.2■□□□□ 0.98
TRIOO75962 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIOO75962 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIOO75962 REXO1L10P-201ENST00000615707 1290 ntBASIC21.2■□□□□ 0.98
TRIOO75962 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIOO75962 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIOO75962 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIOO75962 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIOO75962 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
TRIOO75962 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIOO75962 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TRIOO75962 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIOO75962 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIOO75962 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIOO75962 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIOO75962 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIOO75962 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIOO75962 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIOO75962 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIOO75962 AF186192.3-201ENST00000583427 947 ntBASIC21.19■□□□□ 0.98
TRIOO75962 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIOO75962 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIOO75962 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIOO75962 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIOO75962 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIOO75962 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
TRIOO75962 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIOO75962 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRIOO75962 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIOO75962 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIOO75962 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIOO75962 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIOO75962 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRIOO75962 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIOO75962 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIOO75962 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.18■□□□□ 0.98
TRIOO75962 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIOO75962 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIOO75962 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIOO75962 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIOO75962 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIOO75962 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIOO75962 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIOO75962 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIOO75962 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRIOO75962 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIOO75962 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRIOO75962 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIOO75962 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIOO75962 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIOO75962 AC005521.1-201ENST00000393351 872 ntBASIC21.17■□□□□ 0.98
TRIOO75962 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIOO75962 KRT18P22-201ENST00000402024 1347 ntBASIC21.17■□□□□ 0.98
TRIOO75962 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIOO75962 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIOO75962 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIOO75962 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
TRIOO75962 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
TRIOO75962 AC010542.4-201ENST00000563151 1910 ntBASIC21.17■□□□□ 0.98
TRIOO75962 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIOO75962 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIOO75962 KRT18P68-201ENST00000392293 1000 ntBASIC21.17■□□□□ 0.98
TRIOO75962 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIOO75962 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIOO75962 AC005829.2-201ENST00000571422 1056 ntBASIC21.17■□□□□ 0.98
TRIOO75962 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TRIOO75962 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIOO75962 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIOO75962 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.16■□□□□ 0.98
TRIOO75962 FAM21FP-204ENST00000608637 956 ntBASIC21.16■□□□□ 0.98
TRIOO75962 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.16■□□□□ 0.98
TRIOO75962 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIOO75962 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIOO75962 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIOO75962 CYP2D8P-201ENST00000433633 1490 ntBASIC21.16■□□□□ 0.98
TRIOO75962 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIOO75962 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIOO75962 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIOO75962 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIOO75962 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIOO75962 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIOO75962 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIOO75962 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRIOO75962 AC091799.1-201ENST00000422823 811 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms