Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF4O60810 AC027702.1-201ENST00000563810 1770 ntBASIC19.88■□□□□ 0.77
PRAMEF4O60810 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF4O60810 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PRAMEF4O60810 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF4O60810 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF4O60810 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF4O60810 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF4O60810 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF4O60810 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.88■□□□□ 0.77
PRAMEF4O60810 AL121603.2-201ENST00000557373 2117 ntBASIC19.88■□□□□ 0.77
PRAMEF4O60810 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF4O60810 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF4O60810 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF4O60810 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
PRAMEF4O60810 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF4O60810 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF4O60810 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PRAMEF4O60810 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF4O60810 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.87■□□□□ 0.77
PRAMEF4O60810 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.87■□□□□ 0.77
PRAMEF4O60810 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF4O60810 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF4O60810 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.87■□□□□ 0.77
PRAMEF4O60810 FP700111.2-201ENST00000619190 1892 ntBASIC19.87■□□□□ 0.77
PRAMEF4O60810 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF4O60810 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF4O60810 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.87■□□□□ 0.77
PRAMEF4O60810 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PRAMEF4O60810 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.87■□□□□ 0.77
PRAMEF4O60810 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF4O60810 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF4O60810 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 AC073130.3-201ENST00000624389 2278 ntBASIC19.86■□□□□ 0.77
PRAMEF4O60810 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF4O60810 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF4O60810 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF4O60810 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF4O60810 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF4O60810 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF4O60810 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF4O60810 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF4O60810 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF4O60810 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.86■□□□□ 0.77
PRAMEF4O60810 AC116050.2-201ENST00000612102 1779 ntBASIC19.85■□□□□ 0.77
PRAMEF4O60810 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF4O60810 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
PRAMEF4O60810 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF4O60810 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF4O60810 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF4O60810 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.85■□□□□ 0.77
PRAMEF4O60810 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.85■□□□□ 0.77
PRAMEF4O60810 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF4O60810 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF4O60810 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PRAMEF4O60810 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF4O60810 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF4O60810 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PRAMEF4O60810 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PRAMEF4O60810 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF4O60810 LINC01521-201ENST00000504184 1943 ntBASIC19.84■□□□□ 0.77
PRAMEF4O60810 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF4O60810 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF4O60810 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF4O60810 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF4O60810 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.84■□□□□ 0.77
PRAMEF4O60810 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
PRAMEF4O60810 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF4O60810 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF4O60810 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
PRAMEF4O60810 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEF4O60810 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.83■□□□□ 0.77
PRAMEF4O60810 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
PRAMEF4O60810 AC006015.1-201ENST00000429970 570 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms