Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 KRT18P20-201ENST00000548986 1279 ntBASIC19.68■□□□□ 0.74
PCDH7O60245 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDH7O60245 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH7O60245 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH7O60245 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDH7O60245 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH7O60245 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH7O60245 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH7O60245 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDH7O60245 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDH7O60245 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
PCDH7O60245 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 FP700111.2-201ENST00000619190 1892 ntBASIC19.67■□□□□ 0.74
PCDH7O60245 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.67■□□□□ 0.74
PCDH7O60245 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PCDH7O60245 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCDH7O60245 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDH7O60245 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCDH7O60245 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDH7O60245 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH7O60245 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH7O60245 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDH7O60245 AC073314.1-201ENST00000568729 2216 ntBASIC19.67■□□□□ 0.74
PCDH7O60245 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH7O60245 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PCDH7O60245 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH7O60245 AP005212.1-201ENST00000581547 1997 ntBASIC19.66■□□□□ 0.74
PCDH7O60245 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH7O60245 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH7O60245 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH7O60245 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH7O60245 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH7O60245 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH7O60245 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH7O60245 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDH7O60245 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH7O60245 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH7O60245 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH7O60245 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH7O60245 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH7O60245 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH7O60245 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH7O60245 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH7O60245 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
PCDH7O60245 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 AC092667.1-201ENST00000434301 2586 ntBASIC19.65■□□□□ 0.74
PCDH7O60245 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
PCDH7O60245 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 KRT19P1-201ENST00000405746 1186 ntBASIC19.65■□□□□ 0.74
PCDH7O60245 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDH7O60245 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH7O60245 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDH7O60245 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH7O60245 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
PCDH7O60245 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH7O60245 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH7O60245 GABARAPL3-202ENST00000624044 1851 ntBASIC19.65■□□□□ 0.74
PCDH7O60245 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDH7O60245 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.64■□□□□ 0.74
PCDH7O60245 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH7O60245 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH7O60245 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH7O60245 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.64■□□□□ 0.73
PCDH7O60245 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH7O60245 KRT18P61-201ENST00000585825 1298 ntBASIC19.64■□□□□ 0.73
PCDH7O60245 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH7O60245 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH7O60245 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDH7O60245 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH7O60245 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
PCDH7O60245 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH7O60245 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH7O60245 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms