Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SSSCA1O60232 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SSSCA1O60232 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.79■□□□□ 0.28
SSSCA1O60232 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.79■□□□□ 0.28
SSSCA1O60232 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.79■□□□□ 0.28
SSSCA1O60232 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.79■□□□□ 0.28
SSSCA1O60232 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SSSCA1O60232 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.79■□□□□ 0.28
SSSCA1O60232 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.79■□□□□ 0.28
SSSCA1O60232 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SSSCA1O60232 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.79■□□□□ 0.28
SSSCA1O60232 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSSCA1O60232 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SSSCA1O60232 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSSCA1O60232 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.78■□□□□ 0.28
SSSCA1O60232 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSSCA1O60232 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.78■□□□□ 0.28
SSSCA1O60232 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSSCA1O60232 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSSCA1O60232 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SSSCA1O60232 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSSCA1O60232 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSSCA1O60232 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SSSCA1O60232 AL020996.1-203ENST00000536896 2307 ntBASIC16.78■□□□□ 0.28
SSSCA1O60232 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.78■□□□□ 0.28
SSSCA1O60232 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SSSCA1O60232 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.78■□□□□ 0.28
SSSCA1O60232 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSSCA1O60232 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.78■□□□□ 0.28
SSSCA1O60232 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSSCA1O60232 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SSSCA1O60232 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSSCA1O60232 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SSSCA1O60232 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSSCA1O60232 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SSSCA1O60232 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SSSCA1O60232 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SSSCA1O60232 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSSCA1O60232 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSSCA1O60232 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSSCA1O60232 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SSSCA1O60232 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
SSSCA1O60232 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSSCA1O60232 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSSCA1O60232 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.77■□□□□ 0.28
SSSCA1O60232 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSSCA1O60232 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSSCA1O60232 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.77■□□□□ 0.27
SSSCA1O60232 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSSCA1O60232 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SSSCA1O60232 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.77■□□□□ 0.27
SSSCA1O60232 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSSCA1O60232 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.76■□□□□ 0.27
SSSCA1O60232 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SSSCA1O60232 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSSCA1O60232 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SSSCA1O60232 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSSCA1O60232 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSSCA1O60232 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSSCA1O60232 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SSSCA1O60232 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.76■□□□□ 0.27
SSSCA1O60232 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.76■□□□□ 0.27
SSSCA1O60232 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.76■□□□□ 0.27
SSSCA1O60232 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.76■□□□□ 0.27
SSSCA1O60232 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSSCA1O60232 SMG8-203ENST00000578922 2178 ntBASIC16.76■□□□□ 0.27
SSSCA1O60232 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.76■□□□□ 0.27
SSSCA1O60232 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSSCA1O60232 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSSCA1O60232 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSSCA1O60232 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSSCA1O60232 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.76■□□□□ 0.27
SSSCA1O60232 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SSSCA1O60232 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SSSCA1O60232 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSSCA1O60232 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.75■□□□□ 0.27
SSSCA1O60232 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SSSCA1O60232 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSSCA1O60232 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSSCA1O60232 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SSSCA1O60232 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSSCA1O60232 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSSCA1O60232 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSSCA1O60232 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSSCA1O60232 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SSSCA1O60232 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSSCA1O60232 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms