Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
XRCC2O43543 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
XRCC2O43543 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.88■□□□□ 0.45
XRCC2O43543 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 AC097381.1-201ENST00000429019 1296 ntBASIC17.88■□□□□ 0.45
XRCC2O43543 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.88■□□□□ 0.45
XRCC2O43543 SLC7A5P1-201ENST00000568957 537 ntBASIC17.88■□□□□ 0.45
XRCC2O43543 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.88■□□□□ 0.45
XRCC2O43543 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.88■□□□□ 0.45
XRCC2O43543 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.88■□□□□ 0.45
XRCC2O43543 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
XRCC2O43543 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.88■□□□□ 0.45
XRCC2O43543 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
XRCC2O43543 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
XRCC2O43543 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.87■□□□□ 0.45
XRCC2O43543 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.87■□□□□ 0.45
XRCC2O43543 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.87■□□□□ 0.45
XRCC2O43543 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.87■□□□□ 0.45
XRCC2O43543 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
XRCC2O43543 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.87■□□□□ 0.45
XRCC2O43543 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
XRCC2O43543 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XRCC2O43543 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.87■□□□□ 0.45
XRCC2O43543 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
XRCC2O43543 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
XRCC2O43543 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.86■□□□□ 0.45
XRCC2O43543 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.86■□□□□ 0.45
XRCC2O43543 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.86■□□□□ 0.45
XRCC2O43543 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 MIR6821-201ENST00000617625 74 ntBASIC17.86■□□□□ 0.45
XRCC2O43543 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
XRCC2O43543 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
XRCC2O43543 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XRCC2O43543 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.85■□□□□ 0.45
XRCC2O43543 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
XRCC2O43543 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
XRCC2O43543 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.85■□□□□ 0.45
XRCC2O43543 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
XRCC2O43543 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
XRCC2O43543 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.85■□□□□ 0.45
XRCC2O43543 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 AC243732.1-201ENST00000612648 864 ntBASIC17.85■□□□□ 0.45
XRCC2O43543 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XRCC2O43543 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.84■□□□□ 0.45
XRCC2O43543 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
XRCC2O43543 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
XRCC2O43543 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms