Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PROM1O43490 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PROM1O43490 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PROM1O43490 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PROM1O43490 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PROM1O43490 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
PROM1O43490 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.55■□□□□ 0.72
PROM1O43490 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PROM1O43490 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PROM1O43490 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.55■□□□□ 0.72
PROM1O43490 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PROM1O43490 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PROM1O43490 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PROM1O43490 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PROM1O43490 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PROM1O43490 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PROM1O43490 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PROM1O43490 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.54■□□□□ 0.72
PROM1O43490 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PROM1O43490 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PROM1O43490 TERF1P5-201ENST00000477545 1207 ntBASIC19.54■□□□□ 0.72
PROM1O43490 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.54■□□□□ 0.72
PROM1O43490 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.54■□□□□ 0.72
PROM1O43490 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.54■□□□□ 0.72
PROM1O43490 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.54■□□□□ 0.72
PROM1O43490 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PROM1O43490 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PROM1O43490 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PROM1O43490 AC006128.1-201ENST00000624704 1661 ntBASIC19.54■□□□□ 0.72
PROM1O43490 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PROM1O43490 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.54■□□□□ 0.72
PROM1O43490 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PROM1O43490 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PROM1O43490 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PROM1O43490 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PROM1O43490 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PROM1O43490 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PROM1O43490 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.53■□□□□ 0.72
PROM1O43490 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PROM1O43490 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PROM1O43490 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.53■□□□□ 0.72
PROM1O43490 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.53■□□□□ 0.72
PROM1O43490 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.53■□□□□ 0.72
PROM1O43490 MFSD11-216ENST00000590393 1141 ntBASIC19.53■□□□□ 0.72
PROM1O43490 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
PROM1O43490 AL137784.2-201ENST00000607332 1000 ntBASIC19.53■□□□□ 0.72
PROM1O43490 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PROM1O43490 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PROM1O43490 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PROM1O43490 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.53■□□□□ 0.72
PROM1O43490 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PROM1O43490 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PROM1O43490 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PROM1O43490 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PROM1O43490 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PROM1O43490 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PROM1O43490 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PROM1O43490 AC073130.3-201ENST00000624389 2278 ntBASIC19.53■□□□□ 0.72
PROM1O43490 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.52■□□□□ 0.72
PROM1O43490 AC116050.2-201ENST00000612102 1779 ntBASIC19.52■□□□□ 0.72
PROM1O43490 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PROM1O43490 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PROM1O43490 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PROM1O43490 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
PROM1O43490 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.52■□□□□ 0.72
PROM1O43490 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.52■□□□□ 0.72
PROM1O43490 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.52■□□□□ 0.72
PROM1O43490 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.52■□□□□ 0.72
PROM1O43490 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PROM1O43490 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.52■□□□□ 0.72
PROM1O43490 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PROM1O43490 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.52■□□□□ 0.72
PROM1O43490 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.52■□□□□ 0.72
PROM1O43490 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PROM1O43490 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.52■□□□□ 0.72
PROM1O43490 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PROM1O43490 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PROM1O43490 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PROM1O43490 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
PROM1O43490 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PROM1O43490 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.51■□□□□ 0.71
PROM1O43490 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.51■□□□□ 0.71
PROM1O43490 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
PROM1O43490 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PROM1O43490 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PROM1O43490 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PROM1O43490 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PROM1O43490 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.51■□□□□ 0.71
PROM1O43490 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PROM1O43490 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.51■□□□□ 0.71
PROM1O43490 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.51■□□□□ 0.71
PROM1O43490 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.51■□□□□ 0.71
PROM1O43490 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PROM1O43490 AC011767.1-201ENST00000617410 1153 ntBASIC19.51■□□□□ 0.71
PROM1O43490 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.51■□□□□ 0.71
PROM1O43490 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.51■□□□□ 0.71
PROM1O43490 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PROM1O43490 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PROM1O43490 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.51■□□□□ 0.71
PROM1O43490 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms