Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.67■□□□□ 0.58
SMAD9O15198 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.67■□□□□ 0.58
SMAD9O15198 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.67■□□□□ 0.58
SMAD9O15198 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.67■□□□□ 0.58
SMAD9O15198 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.67■□□□□ 0.58
SMAD9O15198 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.67■□□□□ 0.58
SMAD9O15198 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.67■□□□□ 0.58
SMAD9O15198 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.67■□□□□ 0.58
SMAD9O15198 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SMAD9O15198 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.67■□□□□ 0.58
SMAD9O15198 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD9O15198 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.66■□□□□ 0.58
SMAD9O15198 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SMAD9O15198 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.66■□□□□ 0.58
SMAD9O15198 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD9O15198 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.66■□□□□ 0.58
SMAD9O15198 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.66■□□□□ 0.58
SMAD9O15198 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD9O15198 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
SMAD9O15198 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.66■□□□□ 0.58
SMAD9O15198 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.66■□□□□ 0.58
SMAD9O15198 AC010536.3-201ENST00000620306 533 ntBASIC18.66■□□□□ 0.58
SMAD9O15198 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD9O15198 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.66■□□□□ 0.58
SMAD9O15198 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD9O15198 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD9O15198 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD9O15198 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMAD9O15198 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SMAD9O15198 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMAD9O15198 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.65■□□□□ 0.58
SMAD9O15198 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.65■□□□□ 0.58
SMAD9O15198 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.65■□□□□ 0.58
SMAD9O15198 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.65■□□□□ 0.58
SMAD9O15198 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.65■□□□□ 0.58
SMAD9O15198 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.65■□□□□ 0.58
SMAD9O15198 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SMAD9O15198 AC080038.1-201ENST00000611274 1154 ntBASIC18.65■□□□□ 0.58
SMAD9O15198 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMAD9O15198 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMAD9O15198 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.64■□□□□ 0.58
SMAD9O15198 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SMAD9O15198 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMAD9O15198 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMAD9O15198 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMAD9O15198 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.64■□□□□ 0.57
SMAD9O15198 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SMAD9O15198 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMAD9O15198 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.64■□□□□ 0.57
SMAD9O15198 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.64■□□□□ 0.57
SMAD9O15198 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.64■□□□□ 0.57
SMAD9O15198 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SMAD9O15198 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMAD9O15198 RBM17P2-201ENST00000616397 1405 ntBASIC18.64■□□□□ 0.57
SMAD9O15198 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMAD9O15198 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.64■□□□□ 0.57
SMAD9O15198 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SMAD9O15198 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.64■□□□□ 0.57
SMAD9O15198 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.64■□□□□ 0.57
SMAD9O15198 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMAD9O15198 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.63■□□□□ 0.57
SMAD9O15198 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMAD9O15198 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMAD9O15198 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMAD9O15198 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMAD9O15198 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.63■□□□□ 0.57
SMAD9O15198 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.63■□□□□ 0.57
SMAD9O15198 DUX4L16-201ENST00000555130 1264 ntBASIC18.63■□□□□ 0.57
SMAD9O15198 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMAD9O15198 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
SMAD9O15198 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMAD9O15198 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.63■□□□□ 0.57
SMAD9O15198 RARRES2P11-201ENST00000635158 484 ntBASIC18.63■□□□□ 0.57
SMAD9O15198 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms