Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAFD1O14545 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAFD1O14545 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAFD1O14545 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAFD1O14545 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRAFD1O14545 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAFD1O14545 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
TRAFD1O14545 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAFD1O14545 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAFD1O14545 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAFD1O14545 AC080038.1-201ENST00000611274 1154 ntBASIC21.12■□□□□ 0.97
TRAFD1O14545 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAFD1O14545 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAFD1O14545 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAFD1O14545 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAFD1O14545 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAFD1O14545 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAFD1O14545 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAFD1O14545 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TRAFD1O14545 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.11■□□□□ 0.97
TRAFD1O14545 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAFD1O14545 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRAFD1O14545 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAFD1O14545 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.11■□□□□ 0.97
TRAFD1O14545 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.11■□□□□ 0.97
TRAFD1O14545 DUX4L16-201ENST00000555130 1264 ntBASIC21.11■□□□□ 0.97
TRAFD1O14545 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAFD1O14545 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAFD1O14545 LINC01006-201ENST00000333319 2292 ntBASIC21.11■□□□□ 0.97
TRAFD1O14545 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAFD1O14545 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.1■□□□□ 0.97
TRAFD1O14545 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TRAFD1O14545 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.1■□□□□ 0.97
TRAFD1O14545 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAFD1O14545 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAFD1O14545 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAFD1O14545 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAFD1O14545 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAFD1O14545 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAFD1O14545 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRAFD1O14545 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.1■□□□□ 0.97
TRAFD1O14545 CDCA4P2-201ENST00000441182 718 ntBASIC21.1■□□□□ 0.97
TRAFD1O14545 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.1■□□□□ 0.97
TRAFD1O14545 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAFD1O14545 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRAFD1O14545 RAP2CP1-201ENST00000605103 478 ntBASIC21.1■□□□□ 0.97
TRAFD1O14545 AC010536.3-201ENST00000620306 533 ntBASIC21.1■□□□□ 0.97
TRAFD1O14545 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TRAFD1O14545 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.1■□□□□ 0.97
TRAFD1O14545 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAFD1O14545 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRAFD1O14545 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRAFD1O14545 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAFD1O14545 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRAFD1O14545 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAFD1O14545 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAFD1O14545 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRAFD1O14545 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRAFD1O14545 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAFD1O14545 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAFD1O14545 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.09■□□□□ 0.97
TRAFD1O14545 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAFD1O14545 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAFD1O14545 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAFD1O14545 RARRES2P11-201ENST00000635158 484 ntBASIC21.09■□□□□ 0.97
TRAFD1O14545 AC073111.5-205ENST00000641717 521 ntBASIC21.09■□□□□ 0.97
TRAFD1O14545 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAFD1O14545 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
TRAFD1O14545 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAFD1O14545 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAFD1O14545 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAFD1O14545 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
TRAFD1O14545 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
TRAFD1O14545 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.08■□□□□ 0.97
TRAFD1O14545 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.08■□□□□ 0.97
TRAFD1O14545 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
TRAFD1O14545 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAFD1O14545 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAFD1O14545 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAFD1O14545 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAFD1O14545 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.08■□□□□ 0.96
TRAFD1O14545 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.08■□□□□ 0.96
TRAFD1O14545 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
TRAFD1O14545 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
TRAFD1O14545 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.08■□□□□ 0.96
TRAFD1O14545 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.08■□□□□ 0.96
TRAFD1O14545 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.07■□□□□ 0.96
TRAFD1O14545 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAFD1O14545 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAFD1O14545 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAFD1O14545 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAFD1O14545 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAFD1O14545 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAFD1O14545 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.07■□□□□ 0.96
TRAFD1O14545 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAFD1O14545 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAFD1O14545 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.06■□□□□ 0.96
TRAFD1O14545 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.06■□□□□ 0.96
TRAFD1O14545 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
TRAFD1O14545 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms