Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.69■□□□□ 0.74
NTN3O00634 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.69■□□□□ 0.74
NTN3O00634 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.69■□□□□ 0.74
NTN3O00634 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NTN3O00634 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NTN3O00634 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NTN3O00634 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.68■□□□□ 0.74
NTN3O00634 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.68■□□□□ 0.74
NTN3O00634 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.68■□□□□ 0.74
NTN3O00634 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.68■□□□□ 0.74
NTN3O00634 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.68■□□□□ 0.74
NTN3O00634 PGM5P4-201ENST00000421970 445 ntBASIC19.68■□□□□ 0.74
NTN3O00634 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.68■□□□□ 0.74
NTN3O00634 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.68■□□□□ 0.74
NTN3O00634 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NTN3O00634 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.68■□□□□ 0.74
NTN3O00634 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NTN3O00634 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NTN3O00634 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.68■□□□□ 0.74
NTN3O00634 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NTN3O00634 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NTN3O00634 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NTN3O00634 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NTN3O00634 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NTN3O00634 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NTN3O00634 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
NTN3O00634 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.67■□□□□ 0.74
NTN3O00634 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.67■□□□□ 0.74
NTN3O00634 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.67■□□□□ 0.74
NTN3O00634 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.67■□□□□ 0.74
NTN3O00634 MTDHP1-201ENST00000605323 784 ntBASIC19.67■□□□□ 0.74
NTN3O00634 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NTN3O00634 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NTN3O00634 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NTN3O00634 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NTN3O00634 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NTN3O00634 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NTN3O00634 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.66■□□□□ 0.74
NTN3O00634 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NTN3O00634 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NTN3O00634 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NTN3O00634 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.66■□□□□ 0.74
NTN3O00634 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.66■□□□□ 0.74
NTN3O00634 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NTN3O00634 AC005829.2-201ENST00000571422 1056 ntBASIC19.66■□□□□ 0.74
NTN3O00634 AC120498.8-201ENST00000614275 531 ntBASIC19.66■□□□□ 0.74
NTN3O00634 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.66■□□□□ 0.74
NTN3O00634 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.66■□□□□ 0.74
NTN3O00634 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
NTN3O00634 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NTN3O00634 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NTN3O00634 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NTN3O00634 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NTN3O00634 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.65■□□□□ 0.74
NTN3O00634 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.65■□□□□ 0.74
NTN3O00634 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NTN3O00634 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NTN3O00634 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NTN3O00634 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NTN3O00634 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NTN3O00634 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NTN3O00634 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.65■□□□□ 0.74
NTN3O00634 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NTN3O00634 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NTN3O00634 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NTN3O00634 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NTN3O00634 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NTN3O00634 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NTN3O00634 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
NTN3O00634 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.64■□□□□ 0.74
NTN3O00634 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NTN3O00634 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
NTN3O00634 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NTN3O00634 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NTN3O00634 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NTN3O00634 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NTN3O00634 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NTN3O00634 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NTN3O00634 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.64■□□□□ 0.73
NTN3O00634 SNORA78-201ENST00000459373 127 ntBASIC19.64■□□□□ 0.73
NTN3O00634 AC133681.1-201ENST00000465482 601 ntBASIC19.64■□□□□ 0.73
NTN3O00634 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NTN3O00634 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NTN3O00634 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NTN3O00634 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
NTN3O00634 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NTN3O00634 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.64■□□□□ 0.73
NTN3O00634 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms