Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.74■□□□□ 0.75
CACNA1AO00555 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.73■□□□□ 0.75
CACNA1AO00555 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CACNA1AO00555 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CACNA1AO00555 SLC25A1P4-201ENST00000567977 778 ntBASIC19.73■□□□□ 0.75
CACNA1AO00555 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1AO00555 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.73■□□□□ 0.75
CACNA1AO00555 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1AO00555 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CACNA1AO00555 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.73■□□□□ 0.75
CACNA1AO00555 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CACNA1AO00555 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.73■□□□□ 0.75
CACNA1AO00555 CR769767.2-201ENST00000622735 460 ntBASIC19.73■□□□□ 0.75
CACNA1AO00555 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1AO00555 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.72■□□□□ 0.75
CACNA1AO00555 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.72■□□□□ 0.75
CACNA1AO00555 AC061975.6-201ENST00000579045 1553 ntBASIC19.72■□□□□ 0.75
CACNA1AO00555 HTR7P1-201ENST00000538670 1336 ntBASIC19.72■□□□□ 0.75
CACNA1AO00555 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1AO00555 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.72■□□□□ 0.75
CACNA1AO00555 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1AO00555 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1AO00555 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1AO00555 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1AO00555 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1AO00555 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1AO00555 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1AO00555 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1AO00555 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CACNA1AO00555 CDV3P1-201ENST00000471403 739 ntBASIC19.72■□□□□ 0.75
CACNA1AO00555 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1AO00555 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.72■□□□□ 0.75
CACNA1AO00555 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.72■□□□□ 0.75
CACNA1AO00555 C2orf69P3-201ENST00000565542 1120 ntBASIC19.72■□□□□ 0.75
CACNA1AO00555 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.72■□□□□ 0.75
CACNA1AO00555 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA1AO00555 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA1AO00555 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA1AO00555 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.71■□□□□ 0.75
CACNA1AO00555 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA1AO00555 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA1AO00555 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.71■□□□□ 0.75
CACNA1AO00555 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.71■□□□□ 0.75
CACNA1AO00555 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.71■□□□□ 0.75
CACNA1AO00555 FAM87A-204ENST00000613235 858 ntBASIC19.71■□□□□ 0.75
CACNA1AO00555 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA1AO00555 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CACNA1AO00555 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.71■□□□□ 0.75
CACNA1AO00555 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CACNA1AO00555 AC091799.1-201ENST00000422823 811 ntBASIC19.71■□□□□ 0.75
CACNA1AO00555 LIN28AP1-201ENST00000429574 405 ntBASIC19.71■□□□□ 0.75
CACNA1AO00555 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA1AO00555 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA1AO00555 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1AO00555 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1AO00555 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1AO00555 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.7■□□□□ 0.74
CACNA1AO00555 RNF152P1-201ENST00000397754 604 ntBASIC19.7■□□□□ 0.74
CACNA1AO00555 KRT16P5-201ENST00000455284 522 ntBASIC19.7■□□□□ 0.74
CACNA1AO00555 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1AO00555 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.7■□□□□ 0.74
CACNA1AO00555 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1AO00555 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CACNA1AO00555 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CACNA1AO00555 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1AO00555 KRT8P45-201ENST00000414328 1447 ntBASIC19.7■□□□□ 0.74
CACNA1AO00555 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1AO00555 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.7■□□□□ 0.74
CACNA1AO00555 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.7■□□□□ 0.74
CACNA1AO00555 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1AO00555 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1AO00555 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CACNA1AO00555 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA1AO00555 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.7■□□□□ 0.74
CACNA1AO00555 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1AO00555 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.69■□□□□ 0.74
CACNA1AO00555 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1AO00555 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.69■□□□□ 0.74
CACNA1AO00555 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CACNA1AO00555 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1AO00555 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1AO00555 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1AO00555 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1AO00555 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1AO00555 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1AO00555 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1AO00555 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.69■□□□□ 0.74
CACNA1AO00555 RN7SL510P-201ENST00000581311 263 ntBASIC19.69■□□□□ 0.74
CACNA1AO00555 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.69■□□□□ 0.74
CACNA1AO00555 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.68■□□□□ 0.74
CACNA1AO00555 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA1AO00555 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA1AO00555 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA1AO00555 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CACNA1AO00555 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CACNA1AO00555 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.68■□□□□ 0.74
CACNA1AO00555 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CACNA1AO00555 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.68■□□□□ 0.74
CACNA1AO00555 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.68■□□□□ 0.74
CACNA1AO00555 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms