Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
AP3B1O00203 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
AP3B1O00203 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.81■□□□□ 0.92
AP3B1O00203 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.81■□□□□ 0.92
AP3B1O00203 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.81■□□□□ 0.92
AP3B1O00203 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.81■□□□□ 0.92
AP3B1O00203 SLC7A5P2-201ENST00000553010 536 ntBASIC20.81■□□□□ 0.92
AP3B1O00203 AC027702.1-201ENST00000563810 1770 ntBASIC20.81■□□□□ 0.92
AP3B1O00203 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
AP3B1O00203 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 FP700111.2-201ENST00000619190 1892 ntBASIC20.81■□□□□ 0.92
AP3B1O00203 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3B1O00203 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.8■□□□□ 0.92
AP3B1O00203 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
AP3B1O00203 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.8■□□□□ 0.92
AP3B1O00203 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
AP3B1O00203 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.8■□□□□ 0.92
AP3B1O00203 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.8■□□□□ 0.92
AP3B1O00203 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.8■□□□□ 0.92
AP3B1O00203 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.8■□□□□ 0.92
AP3B1O00203 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.8■□□□□ 0.92
AP3B1O00203 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.8■□□□□ 0.92
AP3B1O00203 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
AP3B1O00203 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.8■□□□□ 0.92
AP3B1O00203 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.8■□□□□ 0.92
AP3B1O00203 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.8■□□□□ 0.92
AP3B1O00203 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3B1O00203 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.79■□□□□ 0.92
AP3B1O00203 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.79■□□□□ 0.92
AP3B1O00203 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3B1O00203 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3B1O00203 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP3B1O00203 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP3B1O00203 AC020907.5-201ENST00000624372 1936 ntBASIC20.79■□□□□ 0.92
AP3B1O00203 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP3B1O00203 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
AP3B1O00203 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3B1O00203 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3B1O00203 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.79■□□□□ 0.92
AP3B1O00203 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
AP3B1O00203 AC073314.1-201ENST00000568729 2216 ntBASIC20.78■□□□□ 0.92
AP3B1O00203 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3B1O00203 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP3B1O00203 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3B1O00203 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
AP3B1O00203 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
AP3B1O00203 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3B1O00203 ZNRF2P3-201ENST00000424200 374 ntBASIC20.78■□□□□ 0.92
AP3B1O00203 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.78■□□□□ 0.92
AP3B1O00203 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3B1O00203 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP3B1O00203 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
AP3B1O00203 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP3B1O00203 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3B1O00203 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3B1O00203 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP3B1O00203 AC004854.2-201ENST00000608450 1441 ntBASIC20.78■□□□□ 0.92
AP3B1O00203 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AP3B1O00203 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AP3B1O00203 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
AP3B1O00203 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
AP3B1O00203 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.77■□□□□ 0.92
AP3B1O00203 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
AP3B1O00203 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.77■□□□□ 0.92
AP3B1O00203 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3B1O00203 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.77■□□□□ 0.92
AP3B1O00203 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.77■□□□□ 0.92
AP3B1O00203 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.77■□□□□ 0.92
AP3B1O00203 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3B1O00203 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AP3B1O00203 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3B1O00203 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3B1O00203 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.77■□□□□ 0.91
AP3B1O00203 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.76■□□□□ 0.91
AP3B1O00203 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.76■□□□□ 0.91
AP3B1O00203 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.76■□□□□ 0.91
AP3B1O00203 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms