Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RTL1A6NKG5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RTL1A6NKG5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC27.57■■■□□ 2
RTL1A6NKG5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC27.57■■■□□ 2
RTL1A6NKG5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC27.57■■■□□ 2
RTL1A6NKG5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
RTL1A6NKG5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC27.57■■■□□ 2
RTL1A6NKG5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC27.57■■■□□ 2
RTL1A6NKG5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC27.57■■■□□ 2
RTL1A6NKG5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RTL1A6NKG5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
RTL1A6NKG5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTL1A6NKG5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
RTL1A6NKG5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC27.56■■■□□ 2
RTL1A6NKG5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
RTL1A6NKG5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTL1A6NKG5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
RTL1A6NKG5 KRT17P3-201ENST00000420566 1262 ntBASIC27.56■■■□□ 2
RTL1A6NKG5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC27.56■■■□□ 2
RTL1A6NKG5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC27.56■■■□□ 2
RTL1A6NKG5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC27.56■■■□□ 2
RTL1A6NKG5 C2orf69P4-201ENST00000565394 541 ntBASIC27.56■■■□□ 2
RTL1A6NKG5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
RTL1A6NKG5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC27.56■■■□□ 2
RTL1A6NKG5 MME-217ENST00000616757 1315 ntTSL 5 BASIC27.55■■■□□ 2
RTL1A6NKG5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC27.55■■■□□ 2
RTL1A6NKG5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RTL1A6NKG5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RTL1A6NKG5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
RTL1A6NKG5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
RTL1A6NKG5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RTL1A6NKG5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC27.55■■■□□ 2
RTL1A6NKG5 PGM5P4-201ENST00000421970 445 ntBASIC27.55■■■□□ 2
RTL1A6NKG5 POM121L13P-201ENST00000422362 380 ntBASIC27.55■■■□□ 2
RTL1A6NKG5 RPPH1-201ENST00000516869 333 ntBASIC27.55■■■□□ 2
RTL1A6NKG5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC27.55■■■□□ 2
RTL1A6NKG5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC27.55■■■□□ 2
RTL1A6NKG5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC27.55■■■□□ 2
RTL1A6NKG5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
RTL1A6NKG5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RTL1A6NKG5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC27.55■■■□□ 2
RTL1A6NKG5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RTL1A6NKG5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
RTL1A6NKG5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC27.54■■■□□ 2
RTL1A6NKG5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC27.54■■■□□ 2
RTL1A6NKG5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
RTL1A6NKG5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC27.54■■■□□ 2
RTL1A6NKG5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
RTL1A6NKG5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC27.54■■■□□ 2
RTL1A6NKG5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC27.54■■■□□ 2
RTL1A6NKG5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
RTL1A6NKG5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC27.54■■■□□ 2
RTL1A6NKG5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC27.54■■■□□ 2
RTL1A6NKG5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC27.54■■■□□ 2
RTL1A6NKG5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC27.54■■■□□ 2
RTL1A6NKG5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
RTL1A6NKG5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RTL1A6NKG5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC27.53■■■□□ 2
RTL1A6NKG5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
RTL1A6NKG5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
RTL1A6NKG5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
RTL1A6NKG5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
RTL1A6NKG5 C1QBPP2-201ENST00000528754 825 ntBASIC27.53■■■□□ 2
RTL1A6NKG5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC27.53■■■□□ 2
RTL1A6NKG5 RN7SL471P-201ENST00000580476 299 ntBASIC27.53■■■□□ 2
RTL1A6NKG5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC27.53■■■□□ 2
RTL1A6NKG5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
RTL1A6NKG5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
RTL1A6NKG5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RTL1A6NKG5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
RTL1A6NKG5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RTL1A6NKG5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC27.52■■■□□ 2
RTL1A6NKG5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC27.52■■■□□ 2
RTL1A6NKG5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RTL1A6NKG5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC27.52■■■□□ 2
RTL1A6NKG5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC27.52■■■□□ 2
RTL1A6NKG5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC27.52■■■□□ 2
RTL1A6NKG5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC27.52■■■□□ 2
RTL1A6NKG5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RTL1A6NKG5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC27.51■■□□□ 1.99
RTL1A6NKG5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
RTL1A6NKG5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RTL1A6NKG5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC27.51■■□□□ 1.99
RTL1A6NKG5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC27.51■■□□□ 1.99
RTL1A6NKG5 ECEL1P1-201ENST00000373592 1742 ntBASIC27.51■■□□□ 1.99
RTL1A6NKG5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RTL1A6NKG5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RTL1A6NKG5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
RTL1A6NKG5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC27.51■■□□□ 1.99
RTL1A6NKG5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC27.51■■□□□ 1.99
RTL1A6NKG5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC27.5■■□□□ 1.99
RTL1A6NKG5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC27.5■■□□□ 1.99
RTL1A6NKG5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTL1A6NKG5 AC233723.2-201ENST00000623798 2106 ntBASIC27.5■■□□□ 1.99
RTL1A6NKG5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
RTL1A6NKG5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTL1A6NKG5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTL1A6NKG5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC27.5■■□□□ 1.99
RTL1A6NKG5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC27.5■■□□□ 1.99
RTL1A6NKG5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC27.49■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms