Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TVP23AA6NH52 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TVP23AA6NH52 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TVP23AA6NH52 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TVP23AA6NH52 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TVP23AA6NH52 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TVP23AA6NH52 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
TVP23AA6NH52 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TVP23AA6NH52 AC079140.4-201ENST00000507448 529 ntBASIC18.39■□□□□ 0.53
TVP23AA6NH52 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.39■□□□□ 0.53
TVP23AA6NH52 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TVP23AA6NH52 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TVP23AA6NH52 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TVP23AA6NH52 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TVP23AA6NH52 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TVP23AA6NH52 FP700111.2-201ENST00000619190 1892 ntBASIC18.39■□□□□ 0.53
TVP23AA6NH52 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.39■□□□□ 0.53
TVP23AA6NH52 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TVP23AA6NH52 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TVP23AA6NH52 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TVP23AA6NH52 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TVP23AA6NH52 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.38■□□□□ 0.53
TVP23AA6NH52 PCDHAC2-203ENST00000615316 3011 ntBASIC18.38■□□□□ 0.53
TVP23AA6NH52 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TVP23AA6NH52 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TVP23AA6NH52 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TVP23AA6NH52 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TVP23AA6NH52 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.38■□□□□ 0.53
TVP23AA6NH52 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.38■□□□□ 0.53
TVP23AA6NH52 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.37■□□□□ 0.53
TVP23AA6NH52 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 AC105265.2-201ENST00000467189 838 ntBASIC18.37■□□□□ 0.53
TVP23AA6NH52 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.37■□□□□ 0.53
TVP23AA6NH52 AC005837.3-201ENST00000612163 286 ntBASIC18.37■□□□□ 0.53
TVP23AA6NH52 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TVP23AA6NH52 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TVP23AA6NH52 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.37■□□□□ 0.53
TVP23AA6NH52 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
TVP23AA6NH52 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TVP23AA6NH52 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TVP23AA6NH52 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TVP23AA6NH52 IRS3P-201ENST00000223076 1006 ntBASIC18.36■□□□□ 0.53
TVP23AA6NH52 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TVP23AA6NH52 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TVP23AA6NH52 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.36■□□□□ 0.53
TVP23AA6NH52 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TVP23AA6NH52 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TVP23AA6NH52 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TVP23AA6NH52 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TVP23AA6NH52 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TVP23AA6NH52 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TVP23AA6NH52 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TVP23AA6NH52 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.36■□□□□ 0.53
TVP23AA6NH52 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.36■□□□□ 0.53
TVP23AA6NH52 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TVP23AA6NH52 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.36■□□□□ 0.53
TVP23AA6NH52 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TVP23AA6NH52 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TVP23AA6NH52 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TVP23AA6NH52 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TVP23AA6NH52 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TVP23AA6NH52 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.35■□□□□ 0.53
TVP23AA6NH52 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TVP23AA6NH52 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.35■□□□□ 0.53
TVP23AA6NH52 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TVP23AA6NH52 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.35■□□□□ 0.53
TVP23AA6NH52 KRT87P-202ENST00000534226 1464 ntBASIC18.35■□□□□ 0.53
TVP23AA6NH52 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TVP23AA6NH52 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TVP23AA6NH52 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TVP23AA6NH52 AC008175.2-201ENST00000612840 297 ntBASIC18.35■□□□□ 0.53
TVP23AA6NH52 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TVP23AA6NH52 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TVP23AA6NH52 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.35■□□□□ 0.53
TVP23AA6NH52 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TVP23AA6NH52 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TVP23AA6NH52 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.34■□□□□ 0.53
TVP23AA6NH52 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
TVP23AA6NH52 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TVP23AA6NH52 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TVP23AA6NH52 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TVP23AA6NH52 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TVP23AA6NH52 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.34■□□□□ 0.53
TVP23AA6NH52 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.34■□□□□ 0.53
TVP23AA6NH52 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TVP23AA6NH52 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms