Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-5A0A0J9YX44 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 AL136162.1-201ENST00000607711 1078 ntBASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRBV5-5A0A0J9YX44 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRBV5-5A0A0J9YX44 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRBV5-5A0A0J9YX44 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 TSPY26P-201ENST00000476365 1326 ntBASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRBV5-5A0A0J9YX44 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV5-5A0A0J9YX44 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 AC099791.1-201ENST00000416440 715 ntBASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 AC008764.7-201ENST00000593779 1081 ntBASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 AC135279.3-201ENST00000610945 1311 ntBASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV5-5A0A0J9YX44 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV5-5A0A0J9YX44 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms