Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
TRAV34A0A0B4J273 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAV34A0A0B4J273 MIR4787-201ENST00000607364 84 ntBASIC15.92■□□□□ 0.14
TRAV34A0A0B4J273 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV34A0A0B4J273 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAV34A0A0B4J273 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAV34A0A0B4J273 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV34A0A0B4J273 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV34A0A0B4J273 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV34A0A0B4J273 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV34A0A0B4J273 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV34A0A0B4J273 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
TRAV34A0A0B4J273 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 AL034346.1-201ENST00000568244 1277 ntBASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV34A0A0B4J273 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRAV34A0A0B4J273 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 AIRN-201ENST00000601203 4374 ntBASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV34A0A0B4J273 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 AC121338.2-201ENST00000622535 1744 ntBASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 AC020907.5-201ENST00000624372 1936 ntBASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV34A0A0B4J273 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRAV34A0A0B4J273 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms