Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV10A0A0B4J240 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 KRT18P68-201ENST00000392293 1000 ntBASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV10A0A0B4J240 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 ITM2C-210ENST00000620962 501 ntBASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 KRT17P1-201ENST00000399211 1546 ntBASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 ECEL1P1-201ENST00000373592 1742 ntBASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV10A0A0B4J240 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 AIRN-201ENST00000601203 4374 ntBASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV10A0A0B4J240 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms