Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 FAM99A-202ENST00000538190 1989 ntBASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 C2orf69P4-201ENST00000565394 541 ntBASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC187A0A096LP49 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC187A0A096LP49 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC187A0A096LP49 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 AC012618.2-201ENST00000428058 849 ntBASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC187A0A096LP49 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CCDC187A0A096LP49 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
CCDC187A0A096LP49 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CCDC187A0A096LP49 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CCDC187A0A096LP49 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC187A0A096LP49 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC187A0A096LP49 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 ECEL1P3-201ENST00000427961 737 ntBASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC187A0A096LP49 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms