Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 POU5F1P4-201ENST00000413175 1085 ntBASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAV27A0A087WT01 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 AC020907.5-201ENST00000624372 1936 ntBASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 AC027612.3-201ENST00000413684 1047 ntBASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV27A0A087WT01 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 AC138907.5-202ENST00000569484 235 ntBASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV27A0A087WT01 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV27A0A087WT01 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV27A0A087WT01 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV27A0A087WT01 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV27A0A087WT01 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 MIR638-201ENST00000385237 100 ntBASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 LINC02228-203ENST00000641970 1355 ntBASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms