Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV18A0A075B6X5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
TRAV18A0A075B6X5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
TRAV18A0A075B6X5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 SRD5A1P1-201ENST00000442297 786 ntBASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 AC009299.2-201ENST00000482477 511 ntBASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV18A0A075B6X5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 KRT16P3-201ENST00000439127 1283 ntBASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV18A0A075B6X5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRAV18A0A075B6X5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV18A0A075B6X5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV18A0A075B6X5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms