Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RNPC3-201ENST00000423855 1872 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
LMO3Q8TAP4 LINC00898-201ENST00000380990 4185 ntTSL 2 BASIC10.02□□□□□ -0.8
LMO3Q8TAP4 C11orf44-201ENST00000317019 3547 ntTSL 2 BASIC10.02□□□□□ -0.8
LMO3Q8TAP4 BPNT1-205ENST00000469520 2737 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 AC103764.1-201ENST00000505083 2096 ntTSL 2 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 RRP12-202ENST00000370992 4425 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 HMHB1-201ENST00000289448 384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 SPANXC-201ENST00000358993 387 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 MITF-205ENST00000394348 1069 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 HNRNPA1P64-201ENST00000411674 922 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 AC012501.1-203ENST00000424322 586 ntTSL 4 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 LENG8-AS1-202ENST00000429922 871 ntTSL 4 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 FTLP2-201ENST00000431458 528 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 AC009365.1-201ENST00000436379 751 ntTSL 2 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 AC008267.4-201ENST00000442005 521 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 AL008627.1-201ENST00000446953 486 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 POLR3KP1-201ENST00000449146 342 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 SLC25A15P2-201ENST00000457292 338 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 AC104451.1-201ENST00000458010 176 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 RN7SL38P-201ENST00000485238 296 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 AC091980.1-201ENST00000524262 288 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 AC116456.1-202ENST00000528151 597 ntTSL 4 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 AL132639.1-201ENST00000553698 475 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 AC016590.2-201ENST00000592319 375 ntTSL 3 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 MTND6P22-201ENST00000604233 521 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 RFPL3-AS1_1.2-201ENST00000618747 88 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 MIR6741-201ENST00000618782 63 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 FAXC-201ENST00000389677 11508 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 MAOA-201ENST00000338702 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 KC6-207ENST00000600644 2311 ntTSL 3 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 RBMS2-207ENST00000552247 1471 ntTSL 5 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 BTBD7-202ENST00000334746 8430 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 SLC9B2-204ENST00000503230 1826 ntTSL 2 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 NLRP1-203ENST00000345221 4656 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 PTCHD1-201ENST00000379361 13714 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 CHRNA6-205ENST00000534622 1872 ntTSL 2 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 AC092620.3-201ENST00000562796 2764 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 TRIM53AP-201ENST00000532014 1544 ntBASIC10.02□□□□□ -0.81
LMO3Q8TAP4 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC10.02□□□□□ -0.81
LMO3Q8TAP4 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AC022182.3-201ENST00000529239 2167 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 CTAGE12P-201ENST00000400348 2364 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 TNS1-209ENST00000446688 4292 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 TMEM116-213ENST00000550831 1446 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 SLC7A13-202ENST00000419776 1618 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 SPDYE10P-201ENST00000576332 2021 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 GLYATL3-201ENST00000371197 1113 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AC018866.1-202ENST00000421820 470 ntTSL 2 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 PGAM1P6-201ENST00000425684 747 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AL161638.2-201ENST00000427319 507 ntTSL 3 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 OR13D2P-201ENST00000430667 907 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 SLC2A1-AS1-202ENST00000431759 1124 ntTSL 2 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AC009502.2-201ENST00000452903 766 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 RN7SL482P-201ENST00000487928 298 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AC008770.1-204ENST00000489336 622 ntTSL 2 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AC110768.2-201ENST00000506540 329 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AC106872.7-201ENST00000508621 312 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 ANKRD46-203ENST00000519316 713 ntTSL 5 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 EIF1AD-202ENST00000525767 743 ntTSL 5 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AC078962.3-201ENST00000545821 482 ntTSL 5 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AC245033.1-201ENST00000562833 880 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AKR1B10P2-201ENST00000577332 927 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 RN7SL381P-201ENST00000577658 298 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AC243960.1-201ENST00000595649 661 ntTSL 5 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AL627309.8-201ENST00000595919 284 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 HCG18-247ENST00000602698 573 ntTSL 3 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 Metazoa_SRP.204-201ENST00000611908 247 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 ATF3-210ENST00000613104 581 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 RN7SL428P-201ENST00000613848 247 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 CCL17-202ENST00000616880 550 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 RN7SL331P-201ENST00000618054 247 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AC078776.2-201ENST00000641021 285 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 REN-202ENST00000638118 1488 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AP002957.1-203ENST00000526091 1897 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 BMS1P2-202ENST00000532854 1858 ntTSL 5 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 FRG2C-201ENST00000308062 2078 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 LINC01007-201ENST00000434537 2291 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 MAPK10-274ENST00000641120 2456 ntBASIC10.01□□□□□ -0.81
LMO3Q8TAP4 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 RBMX-207ENST00000562646 2148 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 TRIM23-201ENST00000231524 4186 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 EBNA1BP2-201ENST00000236051 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LMO3Q8TAP4 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms