Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RIMKLBP1-201ENST00000408914 1164 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 AL596223.2-201ENST00000413220 434 ntTSL 3 BASIC9.92□□□□□ -0.82
SLC1A1P43005 TCEAL4-202ENST00000415568 959 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
SLC1A1P43005 GOT2P3-201ENST00000426641 1289 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 AC013469.1-201ENST00000426985 403 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 AL008718.1-201ENST00000445867 487 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 AL359873.1-201ENST00000447908 764 ntTSL 3 BASIC9.92□□□□□ -0.82
SLC1A1P43005 AC096659.1-201ENST00000456728 549 ntTSL 2 BASIC9.92□□□□□ -0.82
SLC1A1P43005 RN7SL446P-201ENST00000476053 296 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 AC117482.1-201ENST00000490933 911 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 TMEM92-202ENST00000507382 573 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 AC094104.2-201ENST00000509718 622 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 AP002986.1-202ENST00000532116 669 ntTSL 3 BASIC9.92□□□□□ -0.82
SLC1A1P43005 IFITM9P-201ENST00000535743 396 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 PGA5-205ENST00000541528 867 ntTSL 2 BASIC9.92□□□□□ -0.82
SLC1A1P43005 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 OTX2-206ENST00000555006 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 AC012146.3-201ENST00000574352 490 ntTSL 3 BASIC9.92□□□□□ -0.82
SLC1A1P43005 AC004706.1-201ENST00000576138 879 ntTSL 3 BASIC9.92□□□□□ -0.82
SLC1A1P43005 AP001017.1-201ENST00000591378 482 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 CKLF-CMTM1-205ENST00000615332 395 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
SLC1A1P43005 AC000041.2-201ENST00000619824 151 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 AL121955.1-201ENST00000620852 303 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 AP000720.2-201ENST00000623429 769 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 AL355480.3-201ENST00000630128 96 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 LINC01761-201ENST00000424943 2755 ntTSL 2 BASIC9.92□□□□□ -0.82
SLC1A1P43005 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 IGBP1-202ENST00000356413 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 SH3GL3-201ENST00000324537 2012 ntTSL 2 BASIC9.92□□□□□ -0.82
SLC1A1P43005 MMP1-201ENST00000315274 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SLC1A1P43005 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 UTRN-203ENST00000367526 3220 ntTSL 5 BASIC9.92□□□□□ -0.82
SLC1A1P43005 AC008739.5-201ENST00000623035 1938 ntBASIC9.92□□□□□ -0.82
SLC1A1P43005 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC9.91□□□□□ -0.82
SLC1A1P43005 UCA1-201ENST00000397381 2299 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 LINC00870-202ENST00000473713 2693 ntTSL 2 BASIC9.91□□□□□ -0.82
SLC1A1P43005 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SLC1A1P43005 WBP11P1-202ENST00000567636 2972 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 FGF1-204ENST00000378046 2582 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
SLC1A1P43005 CATSPER3-201ENST00000282611 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 C17orf80-205ENST00000535032 2129 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 MLLT3-209ENST00000629733 3264 ntTSL 5 BASIC9.91□□□□□ -0.82
SLC1A1P43005 RIPOR2-202ENST00000378023 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SLC1A1P43005 OR2T29-201ENST00000328570 1014 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
SLC1A1P43005 RNA5SP298-201ENST00000364991 111 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 HSD17B7-202ENST00000367913 666 ntTSL 2 BASIC9.91□□□□□ -0.82
SLC1A1P43005 ZNF684-202ENST00000372697 1028 ntTSL 3 BASIC9.91□□□□□ -0.82
SLC1A1P43005 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 KCNIP1-204ENST00000411494 684 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 SNRPE-202ENST00000414487 942 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 AP000552.2-201ENST00000422450 689 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 LINC01241-201ENST00000423326 1237 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 KRTAP19-10P-201ENST00000445258 187 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 AC093582.1-201ENST00000447086 385 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 OR2S1P-201ENST00000447226 950 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 RPSAP36-201ENST00000465940 869 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 RN7SL865P-201ENST00000466711 289 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 AP000873.2-208ENST00000500634 876 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 AC011487.1-201ENST00000509280 887 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 AC021860.1-201ENST00000515436 376 ntTSL 5 BASIC9.91□□□□□ -0.82
SLC1A1P43005 RAD52-217ENST00000544742 463 ntTSL 4 BASIC9.91□□□□□ -0.82
SLC1A1P43005 AC087798.1-201ENST00000547882 534 ntTSL 5 BASIC9.91□□□□□ -0.82
SLC1A1P43005 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 AC100791.1-201ENST00000570408 324 ntTSL 2 BASIC9.91□□□□□ -0.82
SLC1A1P43005 RN7SL381P-201ENST00000577658 298 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 RN7SL387P-201ENST00000581015 273 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 LINC00969-229ENST00000596584 863 ntTSL 5 BASIC9.91□□□□□ -0.82
SLC1A1P43005 HNRNPA1P52-201ENST00000599047 947 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 AP000962.2-201ENST00000624971 1101 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 AL157931.2-201ENST00000635091 463 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 AC135068.10-201ENST00000638015 913 ntBASIC9.91□□□□□ -0.82
SLC1A1P43005 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SLC1A1P43005 CELF2-202ENST00000399850 7085 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
SLC1A1P43005 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC9.91□□□□□ -0.82
SLC1A1P43005 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC9.91□□□□□ -0.82
SLC1A1P43005 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SLC1A1P43005 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SLC1A1P43005 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 AL512625.3-201ENST00000586625 1440 ntTSL 3 BASIC9.9□□□□□ -0.82
SLC1A1P43005 RBBP8-205ENST00000399725 3260 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 AL096869.3-201ENST00000567837 2626 ntBASIC9.9□□□□□ -0.82
SLC1A1P43005 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 DCAF8L2-202ENST00000451261 2295 ntAPPRIS P1 TSL 4 BASIC9.9□□□□□ -0.82
SLC1A1P43005 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC9.9□□□□□ -0.82
SLC1A1P43005 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 SPIN3-205ENST00000638289 4614 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms