Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 IFT122-210ENST00000504021 3541 ntTSL 2 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 CASP7-205ENST00000369331 2380 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 CCDC172-201ENST00000333254 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 ZSCAN12P1-202ENST00000529104 1657 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 PLCE1-AS1-203ENST00000596633 1683 ntTSL 3 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 WDR33-202ENST00000393006 3574 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AL592158.1-201ENST00000632210 4477 ntBASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AC012613.2-201ENST00000523176 4533 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 C17orf75-201ENST00000225805 4581 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 ZNF491-201ENST00000323169 2471 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 ZBTB10-201ENST00000379091 2181 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AC078883.3-202ENST00000417539 754 ntTSL 3 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AL513122.2-201ENST00000437135 838 ntTSL 3 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AC009945.1-201ENST00000453188 298 ntBASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 RN7SL419P-201ENST00000471592 287 ntBASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AC005996.1-201ENST00000478788 1586 ntBASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 LINC02142-201ENST00000500616 577 ntTSL 3 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 DAPP1-203ENST00000512369 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AC104117.3-201ENST00000519491 674 ntTSL 3 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 IMMP1L-209ENST00000532287 685 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 UBB-204ENST00000535788 704 ntTSL 2 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 DUOXA1-215ENST00000560572 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AC009119.3-201ENST00000562835 388 ntTSL 3 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AC020779.2-201ENST00000568984 393 ntTSL 3 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 ZNF426-203ENST00000589289 919 ntTSL 2 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AC008014.1-203ENST00000611243 1569 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AP003400.4-201ENST00000623832 399 ntBASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AL603840.1-202ENST00000634769 583 ntTSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AL390961.1-202ENST00000636744 1172 ntBASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 AC012508.1-201ENST00000564121 4476 ntBASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 NLRP1-215ENST00000613500 4494 ntTSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 PKD1L2-202ENST00000337114 3427 ntTSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 HIP1-207ENST00000616821 3120 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 SMIM19-204ENST00000438528 2958 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 SNHG16-207ENST00000590435 1947 ntTSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 C2CD5-201ENST00000333957 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 ALDH7A1-232ENST00000637272 2554 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 NEDD1-203ENST00000429527 3366 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 SLC30A9-201ENST00000264451 6218 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 INPP4A-210ENST00000523221 2934 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 ZNF630-201ENST00000276054 2791 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SYCE2Q6PIF2 MAPK10-361ENST00000641862 2462 ntBASIC10.02□□□□□ -0.8
SYCE2Q6PIF2 INTS3-201ENST00000318967 5235 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SYCE2Q6PIF2 BRPF3-211ENST00000534400 4254 ntTSL 5 BASIC10.02□□□□□ -0.8
SYCE2Q6PIF2 UNC119-205ENST00000484980 4189 ntTSL 2 BASIC10.02□□□□□ -0.8
SYCE2Q6PIF2 SLC17A8-202ENST00000392989 1737 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SYCE2Q6PIF2 GFM2-201ENST00000296805 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AC130365.1-201ENST00000530524 1553 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 SLC24A4-201ENST00000393265 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 TWISTNB-201ENST00000222567 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 TNIP3-203ENST00000507879 1778 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 SIX1-201ENST00000247182 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AC009336.3-201ENST00000623777 2620 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 PPP1R2-206ENST00000618156 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 C9orf43-201ENST00000288462 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 USP28-201ENST00000003302 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 INIP-201ENST00000374234 713 ntTSL 2 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 TDRKH-AS1-201ENST00000389897 992 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 EIF4A1P8-201ENST00000394444 1190 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 NINJ2-202ENST00000397265 793 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 LINC01687-202ENST00000419467 465 ntTSL 3 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AP000688.3-201ENST00000445464 348 ntTSL 3 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AL445220.1-201ENST00000456309 559 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AC022701.1-201ENST00000462935 622 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 IFT122-215ENST00000507564 3824 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 ENPP7P1-201ENST00000509557 999 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AP005435.2-201ENST00000525489 590 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 ANKRD42-206ENST00000528722 954 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 ZNF123P-201ENST00000531501 1196 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AC119044.1-201ENST00000553227 404 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AC004828.1-201ENST00000555303 654 ntTSL 3 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AC092120.2-201ENST00000567166 415 ntTSL 5 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 PDE6G-202ENST00000571004 458 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AC004706.1-201ENST00000576138 879 ntTSL 3 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 SOX9-AS1-215ENST00000588177 465 ntTSL 2 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 E2F3P1-201ENST00000589887 1230 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 HMGN1P31-201ENST00000590085 304 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AC006115.3-201ENST00000594400 560 ntTSL 4 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 TTR-204ENST00000610404 1040 ntTSL 5 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 TTR-205ENST00000613781 556 ntTSL 5 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 KRTAP10-12-202ENST00000618832 282 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 CU633906.4-201ENST00000624484 1023 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 FLII-230ENST00000628188 156 ntTSL 5 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 LINC01808-203ENST00000641932 1643 ntBASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AL445309.1-201ENST00000607565 1989 ntBASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms