Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC073111.1-201ENST00000497366 420 ntTSL 3 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC121161.2-201ENST00000502566 659 ntTSL 3 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC090099.3-201ENST00000524640 979 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC009248.1-201ENST00000548155 735 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 MEG8-208ENST00000553465 1176 ntTSL 5 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC009996.1-201ENST00000558006 653 ntTSL 5 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC025627.1-201ENST00000574267 730 ntTSL 5 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 RPL36-205ENST00000579649 449 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AURKC-207ENST00000599062 921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC092723.1-201ENST00000599411 474 ntTSL 5 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC097717.1-251ENST00000608419 183 ntTSL 5 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC004853.2-201ENST00000609561 916 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC002470.1-201ENST00000610278 395 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AL354740.1-202ENST00000612837 290 ntTSL 3 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC243571.2-202ENST00000613901 575 ntTSL 4 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 SLC25A15P4-201ENST00000614260 289 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 SNORA17B-202ENST00000626886 136 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 C2-AS1-201ENST00000630806 762 ntTSL 2 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AL732372.1-203ENST00000635159 994 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AL121832.3-201ENST00000616512 3700 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 MTO1-201ENST00000370300 2961 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 AC008124.1-201ENST00000609803 9730 ntBASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 BTD-206ENST00000437172 2097 ntTSL 2 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 TMEM213-203ENST00000442682 4167 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 ZNF830-201ENST00000361952 2246 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 HAL-203ENST00000541929 3846 ntTSL 2 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 TNFAIP3-208ENST00000615468 3818 ntTSL 5 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 LCLAT1-202ENST00000319406 2774 ntTSL 2 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 GRB2-205ENST00000392564 3182 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 CCDC190-201ENST00000367910 1498 ntAPPRIS P2 TSL 2 BASIC8.77□□□□□ -1.01
NPIPA3F8WFD2 CPA6-201ENST00000297770 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 CHERP-201ENST00000198939 4084 ntTSL 5 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 FAM161B-201ENST00000286544 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 SLC6A12-202ENST00000397296 3294 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 TTF1-203ENST00000612514 1780 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 DNAH7-203ENST00000410072 1937 ntTSL 2 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 FBXW12-202ENST00000415155 1370 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 GRIA2-211ENST00000507898 3041 ntTSL 2 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 AC022762.2-201ENST00000600308 1353 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 USP35-201ENST00000526425 3770 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 RNF40-202ENST00000357890 3917 ntTSL 2 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 ARL5C-201ENST00000269586 540 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 GDF3-201ENST00000329913 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 IL19-202ENST00000340758 1032 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 MIR623-201ENST00000384986 98 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 AL356124.1-201ENST00000430296 728 ntTSL 5 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 PSMD10P1-201ENST00000436861 681 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 FDPSP2-201ENST00000453932 897 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 RN7SL607P-201ENST00000461220 299 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 CREM-237ENST00000488328 1049 ntTSL 2 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 RN7SL242P-201ENST00000491451 297 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 IGHV3-33-2-201ENST00000517703 346 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 AC009901.2-201ENST00000521595 240 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 AC015871.1-201ENST00000557880 1081 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 AL365214.3-204ENST00000587816 894 ntAPPRIS P5 TSL 5 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 AC107990.1-201ENST00000590415 489 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 GNAL-210ENST00000602628 1038 ntTSL 2 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 RN7SL620P-201ENST00000610816 303 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 Metazoa_SRP.197-201ENST00000618956 303 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 AC073862.2-201ENST00000625114 701 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 AC233724.17-201ENST00000639073 597 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 AC106774.8-201ENST00000639081 597 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 AC012377.1-202ENST00000558675 4811 ntBASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 PPM1L-202ENST00000464260 2735 ntTSL 2 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 ST3GAL6-201ENST00000265261 3362 ntTSL 2 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 SLC25A52-201ENST00000269205 1319 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 MYF6-201ENST00000228641 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 MEIS2-211ENST00000559085 2538 ntTSL 2 BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NPIPA3F8WFD2 HIF1A-203ENST00000394997 3922 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 LINC00606-201ENST00000412578 2869 ntTSL 2 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 TCF4-209ENST00000544241 2264 ntTSL 2 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AIG1-202ENST00000357847 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 SUFU-203ENST00000423559 2601 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 LINC00662-201ENST00000561521 2480 ntTSL 2 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 TMEM168-206ENST00000454074 2659 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 ACTG1P9-201ENST00000457622 2658 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AC008663.2-202ENST00000519897 1418 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 RIPPLY1-201ENST00000276173 1172 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 OR10G6-201ENST00000307002 999 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 TAL2-201ENST00000334077 656 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 OR2S2-201ENST00000341959 1047 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 GNRHR2-202ENST00000361928 1035 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 U3.16-201ENST00000384391 209 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AL512635.1-201ENST00000414056 832 ntBASIC8.75□□□□□ -1.01
NPIPA3F8WFD2 AP000844.2-201ENST00000419440 509 ntTSL 4 BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms