Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 COPS5P1-201ENST00000415778 785 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 FAM236D-201ENST00000419795 433 ntAPPRIS P5 TSL 5 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 NLGN4Y-AS1-201ENST00000434164 532 ntTSL 5 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 AL591806.1-201ENST00000447167 1109 ntTSL 3 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 AC092620.1-201ENST00000453636 680 ntTSL 3 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 COX5BP6-201ENST00000454311 211 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 FAM236D-202ENST00000458170 451 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 RN7SL305P-201ENST00000464862 281 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 RN7SL566P-201ENST00000467650 296 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 RPL12P5-201ENST00000475149 392 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 AP003041.2-201ENST00000525666 1180 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 ASB8-211ENST00000539528 839 ntTSL 3 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 AC010542.2-201ENST00000568560 511 ntTSL 5 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 AC010186.4-201ENST00000573622 615 ntTSL 3 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 DYNLL1P3-201ENST00000596113 266 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 AC010615.2-204ENST00000600469 830 ntTSL 3 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 FAM236C-202ENST00000636532 451 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 CLASP2-202ENST00000333778 1989 ntTSL 2 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 AC040162.3-201ENST00000572067 3907 ntBASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 PCBP2-205ENST00000447282 3077 ntTSL 5 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 FAM173B-201ENST00000280330 1928 ntTSL 2 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 SLC5A9-201ENST00000236495 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 TGFBR1-209ENST00000552516 5933 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 ANKRD42-204ENST00000526731 3230 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SYCE2Q6PIF2 KCNN2-202ENST00000503706 1457 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 PCDHGA10-201ENST00000398610 4617 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 SNRNP40-201ENST00000263694 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC084759.3-201ENST00000624468 3944 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 DDX47-202ENST00000358007 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 BBS4-202ENST00000395205 2450 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC087762.2-201ENST00000639346 3773 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC004893.2-201ENST00000360902 3398 ntTSL 2 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 LILRB1-205ENST00000396331 2960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 TRPV3-201ENST00000301365 3235 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 CAVIN2-201ENST00000304141 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 GFM1-210ENST00000486715 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC136944.2-201ENST00000568752 3971 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 MYBPC2-201ENST00000357701 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 COX7A2-202ENST00000370089 773 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 NEK10-203ENST00000383770 1257 ntTSL 5 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 TUBB4BP7-201ENST00000406999 1234 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC092810.3-201ENST00000416349 473 ntTSL 3 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 RFX3-AS1-202ENST00000427722 1088 ntTSL 5 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 OR13C6P-201ENST00000433495 950 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 RPL23P4-201ENST00000442836 416 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AL451124.1-201ENST00000478520 1026 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 EGFLAM-207ENST00000506135 889 ntTSL 3 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AMD1P3-201ENST00000508874 994 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 SEBOX-201ENST00000536498 666 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC078865.1-201ENST00000547174 562 ntTSL 4 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC013391.1-201ENST00000560477 459 ntTSL 3 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC108134.2-201ENST00000570843 748 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 NDUFA3P6-201ENST00000571486 250 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC005838.2-201ENST00000584643 317 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC245595.2-202ENST00000611488 1197 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 MDS2-203ENST00000612756 420 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 CCL4L2-211ENST00000613173 741 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC133485.6-201ENST00000624045 688 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC245100.4-207ENST00000640776 1082 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 PPP1R11-203ENST00000376765 1536 ntTSL 3 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 SP100-206ENST00000409897 2037 ntTSL 2 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 HPCAL4-202ENST00000612703 4436 ntTSL 2 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 LINC01343-201ENST00000431311 2283 ntTSL 3 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 CAPZA2-201ENST00000361183 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 MICAL3-202ENST00000383094 2963 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AC008026.3-201ENST00000583426 1707 ntTSL 2 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 ZNF200-204ENST00000414144 3306 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AP005264.8-201ENST00000623093 3313 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 ADH1A-201ENST00000209668 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 AL138831.3-201ENST00000623656 1458 ntBASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 ARMT1-201ENST00000367294 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 CENPP-202ENST00000375579 2570 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 RMI1-201ENST00000325875 3420 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 ZDHHC6-205ENST00000626395 2906 ntTSL 5 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 SPOCD1-214ENST00000533231 3774 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 Z82186.1-201ENST00000434707 4364 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SYCE2Q6PIF2 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
SYCE2Q6PIF2 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC10.09□□□□□ -0.79
SYCE2Q6PIF2 DAB2-217ENST00000545653 4537 ntTSL 5 BASIC10.09□□□□□ -0.79
SYCE2Q6PIF2 PRUNE1-201ENST00000271620 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SYCE2Q6PIF2 BHLHB9-204ENST00000448867 3936 ntAPPRIS P1 TSL 4 BASIC10.09□□□□□ -0.79
SYCE2Q6PIF2 PARP8-220ENST00000514342 2384 ntTSL 5 BASIC10.09□□□□□ -0.79
SYCE2Q6PIF2 PAX6-236ENST00000638685 2372 ntTSL 5 BASIC10.09□□□□□ -0.79
SYCE2Q6PIF2 GC-204ENST00000504199 1777 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SYCE2Q6PIF2 ORC1-202ENST00000371568 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SYCE2Q6PIF2 THPO-201ENST00000204615 1855 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SYCE2Q6PIF2 FOXO3-203ENST00000540898 2553 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SYCE2Q6PIF2 SYS1-204ENST00000426004 2915 ntTSL 2 BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms