Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 QTRT2-201ENST00000281273 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 ZBBX-203ENST00000392766 3250 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
SLC1A1P43005 EXOSC10-202ENST00000376936 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC10.03□□□□□ -0.8
SLC1A1P43005 AC073539.1-201ENST00000599810 2094 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 PPP1R10P1-201ENST00000531876 1795 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 SEZ6L-204ENST00000402979 3306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 ERI2-201ENST00000300005 1479 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC10.03□□□□□ -0.8
SLC1A1P43005 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 AL353795.3-201ENST00000624351 5702 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 ZNF615-214ENST00000618049 2284 ntTSL 5 BASIC10.03□□□□□ -0.8
SLC1A1P43005 CFL1P1-203ENST00000438248 2120 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 CLDN2-202ENST00000540876 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 ZNF75BP-201ENST00000546499 1524 ntBASIC10.02□□□□□ -0.8
SLC1A1P43005 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SLC1A1P43005 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
SLC1A1P43005 SORD-203ENST00000558580 1395 ntTSL 5 BASIC10.02□□□□□ -0.8
SLC1A1P43005 C15orf53-201ENST00000318792 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SLC1A1P43005 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
SLC1A1P43005 BZW2-201ENST00000258761 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SLC1A1P43005 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
SLC1A1P43005 CERS3-201ENST00000284382 3894 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 RMND1-201ENST00000336451 1413 ntTSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 MAN1A2P1-201ENST00000590286 1400 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 OR56B3P-201ENST00000316517 947 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 KRTAP20-3-201ENST00000382826 273 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
SLC1A1P43005 RNA5SP377-201ENST00000390852 112 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 RNA5SP376-201ENST00000390949 112 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 LINC01890-201ENST00000415448 1017 ntTSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 PROSER3-203ENST00000421853 650 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.81
SLC1A1P43005 AC078777.1-201ENST00000425371 777 ntTSL 5 BASIC10.02□□□□□ -0.81
SLC1A1P43005 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 AP000290.1-201ENST00000450830 449 ntTSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 AL133406.2-201ENST00000452363 1198 ntTSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 RN7SL116P-201ENST00000470786 305 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 RN7SL359P-201ENST00000473502 288 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 RPSAP38-201ENST00000475442 881 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 RN7SL344P-201ENST00000485522 296 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 TCEAL4-212ENST00000494801 1008 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 MARK2P6-201ENST00000494974 897 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 AC034207.1-201ENST00000506742 948 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 MRPS18C-205ENST00000507349 350 ntTSL 3 BASIC10.02□□□□□ -0.81
SLC1A1P43005 LINC01843-201ENST00000515627 1107 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 AC008066.1-201ENST00000520373 863 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 AC105206.2-201ENST00000523556 515 ntTSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 PROSER3-206ENST00000536950 1266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 AP003721.3-201ENST00000543275 405 ntTSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 AC025423.1-201ENST00000544710 374 ntTSL 5 BASIC10.02□□□□□ -0.81
SLC1A1P43005 RNF41-211ENST00000552656 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 AC010931.1-201ENST00000565063 386 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 AC136944.3-201ENST00000568520 554 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 RN7SL531P-201ENST00000578464 282 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC10.02□□□□□ -0.81
SLC1A1P43005 AC020905.1-201ENST00000587777 575 ntTSL 4 BASIC10.02□□□□□ -0.81
SLC1A1P43005 FLT3LG-203ENST00000594009 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 AP000322.2-201ENST00000608289 510 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 Metazoa_SRP.72-201ENST00000617458 278 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 STRADA-224ENST00000617949 705 ntTSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 AL021368.4-201ENST00000637710 675 ntTSL 3 BASIC10.02□□□□□ -0.81
SLC1A1P43005 AC005906.2-214ENST00000640128 1235 ntTSL 5 BASIC10.02□□□□□ -0.81
SLC1A1P43005 FZD6-201ENST00000358755 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 NPIPA7-202ENST00000530217 1331 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SLC1A1P43005 MLH1-221ENST00000536378 2567 ntTSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 SLC7A3-201ENST00000298085 2235 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 IL6-204ENST00000404625 1527 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SLC1A1P43005 CCL28-203ENST00000513525 1518 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 MAP3K7CL-202ENST00000339024 2066 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 MAP3K7CL-208ENST00000399935 2093 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
SLC1A1P43005 DCTN4-202ENST00000446090 1737 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SLC1A1P43005 AL596275.2-201ENST00000641749 1706 ntBASIC10.02□□□□□ -0.81
SLC1A1P43005 ARMC8-218ENST00000485396 1920 ntTSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 AC012085.2-201ENST00000550287 1587 ntTSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC10.01□□□□□ -0.81
SLC1A1P43005 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 DMD-212ENST00000378723 4645 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 KCNK2-202ENST00000391895 1410 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 FKBP5-204ENST00000542713 7384 ntTSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 RUBCNL-206ENST00000409879 2997 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
SLC1A1P43005 SEPSECS-202ENST00000382103 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 SPDYE9P-202ENST00000571071 2024 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 SPDYE11-203ENST00000573748 2024 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 SPDYE10P-201ENST00000576332 2021 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 POP4-202ENST00000585603 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 GBP2-201ENST00000370466 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SLC1A1P43005 OR10H3-201ENST00000305892 951 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SLC1A1P43005 C6orf58-201ENST00000329722 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms