Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHA3Q9Y5H8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCDHA3Q9Y5H8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA3Q9Y5H8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHA3Q9Y5H8 AL162377.1-201ENST00000618844 1793 ntBASIC21.61■■□□□ 1.05
PCDHA3Q9Y5H8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHA3Q9Y5H8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA3Q9Y5H8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHA3Q9Y5H8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
PCDHA3Q9Y5H8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA3Q9Y5H8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA3Q9Y5H8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHA3Q9Y5H8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDHA3Q9Y5H8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA3Q9Y5H8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
PCDHA3Q9Y5H8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHA3Q9Y5H8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHA3Q9Y5H8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 AC142381.2-201ENST00000566120 298 ntBASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 AC138907.5-202ENST00000569484 235 ntBASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 RARRES2P11-201ENST00000635158 484 ntBASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHA3Q9Y5H8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHA3Q9Y5H8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
PCDHA3Q9Y5H8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA3Q9Y5H8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PCDHA3Q9Y5H8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA3Q9Y5H8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA3Q9Y5H8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHA3Q9Y5H8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHA3Q9Y5H8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHA3Q9Y5H8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.58■■□□□ 1.04
PCDHA3Q9Y5H8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.58■■□□□ 1.04
PCDHA3Q9Y5H8 AL512408.1-201ENST00000569378 2000 ntBASIC21.58■■□□□ 1.04
PCDHA3Q9Y5H8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHA3Q9Y5H8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
PCDHA3Q9Y5H8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHA3Q9Y5H8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 IRS3P-201ENST00000223076 1006 ntBASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHA3Q9Y5H8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHA3Q9Y5H8 KRT16P2-201ENST00000414673 1423 ntBASIC21.55■■□□□ 1.04
PCDHA3Q9Y5H8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHA3Q9Y5H8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA3Q9Y5H8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA3Q9Y5H8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA3Q9Y5H8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA3Q9Y5H8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA3Q9Y5H8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA3Q9Y5H8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHA3Q9Y5H8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms