Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 SLC29A4P1-201ENST00000398760 971 ntBASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 UBE2DNL-204ENST00000602536 740 ntBASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA4Q9Y5G9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 MIR4651-201ENST00000582622 73 ntBASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA4Q9Y5G9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 FBXW4P1-201ENST00000426721 2239 ntBASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA4Q9Y5G9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 EEF1DP3-203ENST00000566025 782 ntBASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDHGA4Q9Y5G9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 FAM201B-201ENST00000458407 597 ntBASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA4Q9Y5G9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.27■□□□□ 0.83
PCDHGA4Q9Y5G9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGA4Q9Y5G9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGA4Q9Y5G9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA4Q9Y5G9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms