Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 AC245052.3-201ENST00000450182 901 ntBASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PCDHB9Q9Y5E1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 FEM1AP4-201ENST00000443167 1987 ntBASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 AP006294.2-201ENST00000641667 209 ntBASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHB9Q9Y5E1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 AF106564.1-201ENST00000607058 2553 ntBASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 AC007375.3-201ENST00000600936 2314 ntBASIC20.98■□□□□ 0.95
PCDHB9Q9Y5E1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 CNN2P6-201ENST00000439038 900 ntBASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 AC098934.4-201ENST00000564127 592 ntBASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 AC243732.1-201ENST00000612648 864 ntBASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 AC013268.1-206ENST00000638368 961 ntBASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 AC112229.1-201ENST00000639295 961 ntBASIC20.97■□□□□ 0.95
PCDHB9Q9Y5E1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB9Q9Y5E1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
PCDHB9Q9Y5E1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.95■□□□□ 0.95
PCDHB9Q9Y5E1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms