Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHMP2BQ9UQN3 AC020907.5-201ENST00000624372 1936 ntBASIC21.02■□□□□ 0.95
CHMP2BQ9UQN3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CHMP2BQ9UQN3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHMP2BQ9UQN3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2BQ9UQN3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2BQ9UQN3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.01■□□□□ 0.95
CHMP2BQ9UQN3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.01■□□□□ 0.95
CHMP2BQ9UQN3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP2BQ9UQN3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP2BQ9UQN3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2BQ9UQN3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2BQ9UQN3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2BQ9UQN3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CHMP2BQ9UQN3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2BQ9UQN3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP2BQ9UQN3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 AC091305.1-201ENST00000479476 895 ntBASIC21■□□□□ 0.95
CHMP2BQ9UQN3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 AC053503.5-201ENST00000601508 636 ntBASIC21■□□□□ 0.95
CHMP2BQ9UQN3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21■□□□□ 0.95
CHMP2BQ9UQN3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 AC012414.1-201ENST00000556676 535 ntBASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 AL031432.3-201ENST00000607698 485 ntBASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CHMP2BQ9UQN3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 AP004607.4-201ENST00000530158 1459 ntBASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.98■□□□□ 0.95
CHMP2BQ9UQN3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 AL136967.2-201ENST00000623968 743 ntBASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHMP2BQ9UQN3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.96■□□□□ 0.95
CHMP2BQ9UQN3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms